Streptomyces lavendulae subsp. lavendulae: SLAV_11830
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Entry
SLAV_11830 CDS
T05314
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SLAV_11830 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slx03019
]
SLAV_11830 (rnc)
03009 Ribosome biogenesis [BR:
slx03009
]
SLAV_11830 (rnc)
03036 Chromosome and associated proteins [BR:
slx03036
]
SLAV_11830 (rnc)
Enzymes [BR:
slx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SLAV_11830 (rnc)
Messenger RNA biogenesis [BR:
slx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLAV_11830 (rnc)
Ribosome biogenesis [BR:
slx03009
]
Eukaryotic type
90S particles
RNase
SLAV_11830 (rnc)
Prokaryotic type
rRNA processing factors
SLAV_11830 (rnc)
Chromosome and associated proteins [BR:
slx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SLAV_11830 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ATZ24230
UniProt:
A0A2K8PDN0
LinkDB
All DBs
Position
complement(2823381..2824232)
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AA seq
283 aa
AA seq
DB search
MSELSNAEKQADSNNAASSHTLLEGRLGYRLESALLVRALTHRSYAYENGGLPTNERLEF
LGDSVLGLVVTDTLYTTHPDLPEGQLAKLRAAVVNSRALAEVGRGLDLGSFIRLGRGEEG
TGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSNLGAGLDWKTSLQE
LTAAEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRGIR
AAADERIAAAAVAAAAPAQDPAPAGTGAADGGAPTPVDPAPGV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagctgtccaacgctgagaagcaggcagacagtaacaacgcggcctcgtcccac
acgcttctggaagggcggctcgggtatcgactcgagtccgcccttctggtgcgtgcgctg
acccaccgctcgtacgcgtacgagaacggcggtctgcccaccaacgaacgcctggagttc
ctcggggactccgtgctgggcctggtggtcacggacacgctgtacaccacccaccccgac
ctgccggaaggccagctggccaaactgcgggccgcggtggtcaactcgcgcgcactggcg
gaggtcgggcgcggcctcgatctcggctccttcatccggctcggccggggcgaagagggc
acgggtggccgggacaaggcctccatcctcgccgacacccttgaagcggtgatcggcgcg
gtctacctcgaccagggcctcgacgcggcctcggagctggtccaccggctcttcgacccg
ctcatcgagaagtcctccaacctcggggccggcctggactggaagaccagtctccaggag
ctcacggcggccgaagggctcggggtgcccgagtacctggtcaccgagaccggaccggac
cacgagaagaccttcaccgctgccgcccgcgtcggtggtgtctcgtacggcaccggcacc
ggccgcagcaagaaggaagcggaacagcaggcggcggagtccgcgtggcgcgggatccgt
gccgccgcggacgagcggatcgcggcagcggccgtggccgccgccgctccggcgcaggac
ccggctccggccgggaccggggccgcggacggcggggcgccgacgcccgtcgacccggcg
ccgggcgtctga
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