Streptomyces lavendulae subsp. lavendulae: SLAV_13060
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Entry
SLAV_13060 CDS
T05314
Symbol
ykoV1
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SLAV_13060 (ykoV1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_13060 (ykoV1)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SLAV_13060 (ykoV1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ATZ24470
UniProt:
A0A2K8PEC5
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Position
3088922..3090076
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AA seq
384 aa
AA seq
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MRSIWNGAISFGLVSIPIKLVNATESHSISFRQIHVSDGGRVRYRKVCELDGEEVPAAEI
GKGYEEADGSIVPITDEDLARLPIPTAKTIEIVSFVPAEEIDPLQMDAAYYLAANGATAA
KPYTLLREALKRSRKVAIAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRQPEGVAPEA
SVTVREAELDLADALMATLGEVEIASLHDDYREAVEAMLAAKTGEGFEPAEAVVEPAGGQ
VIDLMAALESSVRAAKASRAGGSGESAESAAEAEVTPIRGRRTPAASAPAPKAVGGKKST
ASTGTAKKTAAAKKTAAGGKKSTATAKGAAGTKSGAGARAGARSTKSASAAGAKSAGTGR
ASAAGATAGAGAAKKAAPRKRSSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatttggaacggggcgatctccttcggcttggtcagcattccgatcaagctc
gtcaacgccaccgagagccactcgatctccttccgtcagatccatgtgagcgacggcggc
cgggtccgctaccgcaaggtgtgcgaactcgacggtgaggaggtgccggccgccgagatc
ggcaaggggtacgaggaggccgacgggtcgatcgtcccgatcacggacgaggacctggcg
cggctgcccatcccgaccgcgaagacgatcgagatcgtgtcgttcgtgccggccgaggag
atcgatccgttgcagatggacgccgcctactacctcgcggcgaacggcgccacggcggcg
aagccgtacacgctgctacgggaggcgctgaagcggagccggaaggtggcgatcgccaag
tacgcgctgcgcgggcgggagcggctcggcatgctgcgggtcgtcgacgacgtgatcgcc
atgcacgggctgctgtggccggacgagatccggcagccggagggcgtggcccccgaggcg
tcggtgaccgtacgggaggccgaactcgatctggccgacgccctgatggccaccctgggc
gaggtggagatcgcctcgctgcacgacgactaccgcgaggccgtggaggccatgctcgcg
gcgaagacgggcgaggggttcgagccggccgaggcggtggtggagccggccggcggccag
gtgatcgacctgatggcggcgctggagagcagcgtacgggcggccaaggcctcccgggcc
gggggttccggggagtccgcggagtccgcggcggaggcggaggtgacgccgatccgcggc
cgcaggacgccggcggcgagcgctcccgcgcccaaggcggtgggcgggaagaagtcgacg
gcgtcgacgggcaccgcgaagaagacggcggccgcgaagaagaccgcggccggggggaag
aagagcaccgccacggccaagggcgcggccggtacgaagtccggggccggggcccgggcc
ggggcccgcagtaccaagtccgcctccgccgccggcgccaagtcggccggtaccggccgg
gcttcggccgccggcgccaccgccggcgcgggggccgccaagaaggcggcgccccgcaag
cggagttcggcctga
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