Streptomyces lavendulae subsp. lavendulae: SLAV_13340
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Entry
SLAV_13340 CDS
T05314
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx00900
Terpenoid backbone biosynthesis
slx00997
Biosynthesis of various other secondary metabolites
slx01100
Metabolic pathways
slx01110
Biosynthesis of secondary metabolites
Module
slx_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SLAV_13340
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
SLAV_13340
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slx01006
]
SLAV_13340
Enzymes [BR:
slx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SLAV_13340
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SLAV_13340
2.5.1.29 geranylgeranyl diphosphate synthase
SLAV_13340
Prenyltransferases [BR:
slx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SLAV_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ATZ24526
UniProt:
A0A2K8PCR7
LinkDB
All DBs
Position
complement(3153691..3154752)
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AA seq
353 aa
AA seq
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MTANAIAAGEGQEAAALLERTRETVNPELRRTVESLPGSMRRVAMYHFGWEDEEGRPTEG
GAGKAIRPALVLASAQALGGPLGGPGGSGERGVVRAAVAVELAHNFTLLHDDVIDKDVRR
RGRPTAWAVFGTPDAIITGDAVMALALRLFAEDPHPAAAAASARLAACVIELCAGQQADC
AFESRPDVALDECLTMATAKTGALLGCACALGALYAGAGPEEVEAMDAFGREAGLAFQLI
DDLIGIWGDPAHTGKPAGADLLARKKSLPVVAALTSGTRAGAELAELYAGPMAGDDVRAA
ARAVERAGGRDWAQAHAADRMGRAVQELSRAVPDLGAAGGLLALAEFVTRRTR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaacgccatcgccgcgggcgaggggcaggaggcggcggccctgctggagcgc
accagagaaacggtcaacccggaactgcgccggaccgtcgagagcctgcccgggtccatg
cggcgggtggcgatgtaccacttcggctgggaggacgaggagggccgcccgacggagggg
ggcgcgggcaaggccatccggcccgcgctcgtcctcgcctccgcgcaggccctgggcggt
ccgctcggcgggcccggcgggtccggtgagcggggggtcgtacgggcggcggtggccgtg
gagctggcgcacaacttcacgctgctgcacgacgacgtcatcgacaaggacgtccgccgg
cgcgggcgtcccacggcctgggccgtcttcgggacaccggacgcgatcatcaccggcgac
gccgtgatggcgctcgcgctgcggctgttcgccgaggacccgcacccggccgcggcggcc
gcctccgcccggctcgcggcctgcgtcatcgagctgtgcgccggacagcaggcggactgc
gccttcgaaagccgtccggacgtcgcgctcgacgagtgcctgaccatggcgacggcgaag
accggggccctgctgggctgcgcgtgcgccctgggcgcgctctacgcgggggccgggccg
gaggaggtcgaggcgatggacgccttcggccgcgaggccgggctggccttccagctgatc
gacgacctgatcggcatctggggggatccggcgcacaccgggaagcccgccggggccgat
ctgctggcccgcaagaagtccctcccggtcgtggccgccctcacctcgggcacccgcgcc
ggggcggagctggcagagctgtacgcgggcccgatggccggggacgacgtgcgcgccgcg
gcccgcgcggtggagcgggcgggcgggcgggactgggcgcaggcccatgccgccgaccgg
atgggccgggcggtgcaggagctgtcccgggccgtcccggacctcggggcggcgggcggg
ctgctggccctggcggagttcgtgacgcgccgtacgaggtga
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