Streptomyces lavendulae subsp. lavendulae: SLAV_13675
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Entry
SLAV_13675 CDS
T05314
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03420
Nucleotide excision repair
slx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLAV_13675 (uvrD1)
03430 Mismatch repair
SLAV_13675 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_13675 (uvrD1)
Enzymes [BR:
slx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLAV_13675 (uvrD1)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLAV_13675 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
SLAV_13675 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
ATZ24591
UniProt:
A0A2K8PCY6
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All DBs
Position
complement(3219718..3221829)
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AA seq
703 aa
AA seq
DB search
MLLGLDPEQREVATTLRGPVCVLAGAGTGKTRAITHRIAYGVRSGMLMPASVLAVTFTNR
AAGEMRGRLRTLGAGGVQARTFHSAALRQLQYFWPRAVGGELPRLLERKIQFVAEAGARC
RIRLDRNELRDVTGEIEWAKVTQTVPADYPAAALKAGREAPRDLAEIAQIYGTYEQLKRD
RGMIDFEDVLLLTVGVLQDRHDIAEQIRAQYQHFVVDEYQDVSPLQQRLLELWLGDRDSL
CVVGDASQTIYSFTGATPDHLLDFRTRYPQATVVKLVRDYRSTPQVVHLANGLLGQARGR
AAEHRLELVSQREPGPDPVYAEYPDEPAEAEGVAGRVRDLIAAGVPAGEIAVLYRINAQS
EVYEQALADAGVPYQLRGAERFFERAEVQKAVLALRGSARSGGSDDPLLQDVVELPSQVR
AVLSSTGWTTEPPTGSGAVRDQWESLAALVRLAEDFARSRPGVTLADLVVELDERRAAQH
APTVQGVTLASLHAAKGLEWDAVFLVGLTDGMMPITYAKTDEQVEEERRLLYVGVTRARH
HLTLSWALSRAPGGRASRRPSRFLNGLRPGSAALGSRPGGPEAGAARKRGRRGPALCRVC
GRTLTEAGEIKLMRCEDCPSDMDEGLYERLRDWRAGQSKLQGMPAYCVFTDKTLMAIAEA
APGEAGQLSMISGVGGRKLERYGADVLAICAGQEPAGADPDDA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctgggcctggacccggagcagcgcgaggtcgccacgaccctgcgcggcccggtg
tgcgtactggccggcgccggcaccggcaagacccgcgcgatcacgcaccgcatcgcgtac
ggggtccgctcgggcatgctcatgcccgccagcgtgctcgccgtcaccttcaccaaccgc
gccgccggagagatgcgcggccgcctgcgcaccctcggcgcaggaggggtccaggcccgc
accttccactccgcggccctgcgccagctccagtacttctggccccgggccgtcgggggc
gagctgccccggctcctggagcgcaagatccagttcgtggccgaggccggcgcccgctgc
cgcatccgcctcgaccgcaacgagctgcgcgacgtcaccggcgagatcgaatgggccaag
gtcacccagaccgtccccgccgactaccccgccgccgccctcaaggccggccgcgaggca
ccccgggacctggccgagatcgcccagatctacggcacgtacgagcaactcaagcgcgac
cgcgggatgatcgacttcgaggacgtgctgctcctcaccgtcggcgtcctccaggaccgc
cacgacatcgccgagcagatccgcgcccagtaccagcacttcgtggtggacgagtaccag
gacgtcagcccgctccagcagcgcctgctcgaactctggctcggcgaccgcgacagcctc
tgcgtcgtcggcgacgccagccagaccatctactccttcaccggggccacccccgaccac
ctgctcgacttccgcacccgctacccgcaggccaccgtcgtcaagctggtccgcgactac
cgttccaccccccaggtggtccacctggccaacggcctgctgggccaggccaggggccgg
gccgcggagcaccgcctggaactggtctcccagcgcgagcccggccccgacccggtctac
gccgagtaccccgacgagcccgccgaggccgagggcgtggccggccgggtccgggacctg
atcgcggccggcgtcccggccggggagatcgccgtcctctaccggatcaacgcccagtcc
gaggtgtacgagcaggccctggccgacgccggggtcccgtaccagctgcgcggggccgag
cggttcttcgagcgggccgaggtccagaaggccgtcctcgccctgcgcggatccgcacgg
tccggcggcagcgacgaccccctcctgcaggacgtggtggaactgccctcccaggtccgg
gccgtgctcagctccaccggctggaccaccgagccgcccacgggttccggagccgtgcgc
gaccagtgggagtccctggccgcgctggtccgcctcgccgaggacttcgcccgcagccgg
cccggcgtgaccctggccgacctcgtcgtcgagctcgacgagcgcagggccgcccagcac
gcgccgaccgtccagggcgtcaccctcgcctcgctgcacgccgccaagggcctggagtgg
gacgccgtgttcctggtcggcctcaccgacggcatgatgccgatcacctacgccaagacc
gacgagcaggtcgaggaggagcgccggctcctgtacgtcggggtcacccgcgcgcggcac
cacctgaccctctcctgggcgctctcccgggctccgggcggccgggcctcccgtcgcccc
agccgcttcctgaacggcctgcggccgggctcggcggccctcggcagccggccgggcggg
cccgaggcgggagcggcccgcaagcgcggccgccgcggaccggcgctgtgccgggtctgc
ggcaggaccctcaccgaggccggcgagatcaagctgatgcgctgcgaggactgcccgtcg
gacatggacgagggcctctacgagcggctgcgcgactggcgcgccggccagtcgaagctc
caggggatgcccgcgtactgcgtgttcacggacaagaccctgatggccatcgccgaggcc
gcgccgggcgaggcggggcagctctcgatgatctccggcgtgggtggtcgcaagcttgag
cggtacggagccgatgtcctggccatctgcgcaggccaggagcctgcgggcgcggatcct
gacgacgcgtag
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