Streptomyces lavendulae subsp. lavendulae: SLAV_15455
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Entry
SLAV_15455 CDS
T05314
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03420
Nucleotide excision repair
slx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLAV_15455 (uvrD2)
03430 Mismatch repair
SLAV_15455 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_15455 (uvrD2)
Enzymes [BR:
slx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLAV_15455 (uvrD2)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLAV_15455 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
SLAV_15455 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DNA_pol3_gamma3
PAP1
Motif
Other DBs
NCBI-ProteinID:
ATZ24945
UniProt:
A0A2K8PH33
LinkDB
All DBs
Position
complement(3596777..3599269)
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AA seq
830 aa
AA seq
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MSSLFDDSFLADLTPSDEVPPPPEDHPAPEPGADDLFGGRFDAPMSGDAYYRDGAPRPVI
DPAVLLDGLNTEQAAAVVHAGSPLLIVAGAGSGKTRVLTHRIGHLLSARGVHPGQILAIT
FTNKAAGEMKERVEGLVGPRANAMWVSTFHSACVRILRRESKRLGFTSSFSIYDAADSKR
LMALVCRDLDLDPKKFPPKSFNAKISNLKNELIDEDAFAAQAADGFEKTLAQAYAMYQGR
LREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGPG
YPDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYKDATTILLEQNYRSTQTILSAAN
AVIERNENRRAKNLWTQAGSGSVITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAIF
YRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDNVPLRRILNV
PKRGIGERAEAMIDALALREKITFPQALRRVDEAFGMAARSTNAVKRFNVLMEELRTIVD
SGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQARDESNPGTLA
EFLEQVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRALGQ
TKELEEERRLAYVGITRARERLYLTRSSMRSAWGTPSYNPPSRFLEEIPAEYLQWKRTGA
SQKPAGPVRGSGYGSSSSSSSGGRSSFGTSPEAFLSSSRTKSGPSGFATRRAADKPVIAL
AVGDRVTHDQFGLGTVMEVRGAGADAQATIDFGDAKPKRLLLRYAPVQKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctggcggacctcaccccctccgacgaggtgccg
cccccgcccgaggaccaccccgccccggagccgggcgcggacgacctcttcgggggccgg
ttcgacgcgcccatgagcggggacgcgtactaccgggacggcgccccccggcccgtcatc
gacccggcggtgctcctggacgggctgaacaccgagcaggccgcggccgtggtgcacgcg
ggctcgccgctgctcatcgtggccggcgccggttccggcaagacccgggtgctgacccac
cgcatcggacacctgctgtccgcgcgcggcgtccaccccggccagatcctggcgatcacc
ttcaccaacaaggccgccggtgagatgaaggagcgcgtcgagggcctcgtcggcccgcgc
gcgaacgccatgtgggtctcgaccttccacagcgcgtgcgtgcggatcctgcgccgcgag
tcgaagcggctcggcttcacctcctcgttctcgatctacgacgcggccgactcgaagcgc
ctgatggcgctcgtctgccgcgacctggacctggacccgaagaagttcccgcccaagtcc
ttcaacgccaagatctcgaacctcaagaacgagctgatcgacgaggacgccttcgccgca
caggccgcggacggcttcgagaagaccctggcccaggcgtacgcgatgtaccagggccgg
ctgcgcgaggccaacgcgctcgacttcgacgacatcatcatgaccaccgtccacctgctc
caggccttcccggacgtcgccgagcactaccggcgccgcttccgccacgtgctggtcgac
gagtaccaggacaccaaccacgcccagtacaccctggtgcgcgagctcgtcggccccggc
tacccggacctgccgcccgccgaactgtgcgtggtgggtgacgccgaccagtcgatctac
gccttccgcggcgcgacgatccgcaacatcctccagttcgaggaggactacaaggacgcg
accacgatcctgctggagcagaactaccgctccacgcagacgatcctgtccgccgccaac
gcggtcatcgagcgcaacgagaaccgccgcgcgaagaacctgtggacccaggccggctcc
ggctcggtgatcaccggctacgtcgcggacaccgagcacgacgaggcccagttcgtcgcc
gacgagatcgaccggctcaccgacgccggcgacgccaaggccggcgacgtggcgatcttc
taccggaccaacgcgcagtcgcgcgtgttcgaggagatcttcatccgtgtcggactgccc
tacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgggacgtcctggcc
tacctgcgcgtcctggcgaaccccgaggacaacgtcccgctccggcgcatcctgaacgtg
cccaagcgcggcatcggcgagcgggccgaggcgatgatcgacgcgctcgcgctgcgcgag
aagatcaccttcccgcaggcgctgcgccgcgtggacgaggccttcggcatggccgcccgc
tccaccaacgccgtcaagcggttcaacgtgctgatggaggagctgcggaccatcgtcgac
tccggcgcgggcccggccgtggtgctggaggcggtcctggagcgcacggggtacctcgcc
gaactccaggcgtcgaccgacccgcaggacgagacgcgcatcgagaacctccaggaactc
gccgccgtggcactggagttcgagcaggcccgggacgagtcgaaccccggcaccctggcc
gagttcctggaacaggtcgcgctcgtcgccgattccgaccagatccccgacgaggacgag
gacggcagcggcgtcatcacgctgatgaccctgcacaccgccaagggcctggagttcccg
gtggtcttcctgacgggcatggaggacggggtcttcccgcacatgcgcgcgctcgggcag
accaaggagctggaggaggagcgccgcctcgcctacgtcggcatcacccgtgcccgcgag
cggctgtacctgacccgctccagcatgcgcagcgcgtggggcaccccctcgtacaacccg
ccctcgcggttcctggaggagatcccggccgagtacctccagtggaagcggacgggtgcc
tcgcagaagccggcgggaccggtgcgcggctccgggtacggctcgtcctcgtcctcgtcg
tccggtggcaggtcctcgttcgggacctcgcccgaggcgttcctgtcctcgtcgcgtacg
aagtcgggtccgtccgggttcgccacgcgccgcgccgccgacaagccggtcatcgcgttg
gcggtcggggaccgggtcacgcacgaccagttcgggctgggcaccgtgatggaggtcagg
ggagcgggcgcggacgcgcaggccaccatcgacttcggggacgccaagccgaagcggctc
ctgctgcgctacgcgccggtccagaagctgtag
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