Streptomyces lavendulae subsp. lavendulae: SLAV_15800
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Entry
SLAV_15800 CDS
T05314
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLAV_15800 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slx03021
]
SLAV_15800 (rpoA)
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_15800 (rpoA)
Enzymes [BR:
slx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLAV_15800 (rpoA)
Transcription machinery [BR:
slx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLAV_15800 (rpoA)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLAV_15800 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ATZ25014
UniProt:
A0A2K8PE44
LinkDB
All DBs
Position
complement(3671822..3672844)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDIILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQLGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgccgt
accctcctgtcctccatcccgggtgccgctgtcaccagcatccgcgtggacggcgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcacggacatcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgccgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcagctgggccaggagatcggc
cgcatcccggtcgactccatctacagcccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggcccctcgccgacggac
gcggccctggccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
taa
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