Streptomyces lavendulae subsp. lavendulae: SLAV_17470
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Entry
SLAV_17470 CDS
T05314
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLAV_17470 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slx03019
]
SLAV_17470 (groL2)
03110 Chaperones and folding catalysts [BR:
slx03110
]
SLAV_17470 (groL2)
03029 Mitochondrial biogenesis [BR:
slx03029
]
SLAV_17470 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slx04147
]
SLAV_17470 (groL2)
Enzymes [BR:
slx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SLAV_17470 (groL2)
Messenger RNA biogenesis [BR:
slx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SLAV_17470 (groL2)
Chaperones and folding catalysts [BR:
slx03110
]
Heat shock proteins
HSP60 / Chaperonin
SLAV_17470 (groL2)
Mitochondrial biogenesis [BR:
slx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SLAV_17470 (groL2)
Exosome [BR:
slx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SLAV_17470 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
SLAV_17470 (groL2)
Exosomal proteins of breast cancer cells
SLAV_17470 (groL2)
Exosomal proteins of colorectal cancer cells
SLAV_17470 (groL2)
Exosomal proteins of bladder cancer cells
SLAV_17470 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
ATZ25344
UniProt:
A0A2K8PF27
LinkDB
All DBs
Position
complement(4004165..4005787)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFNEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSAALLAQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIVNSKIGSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGLDLLGRARKVVITKDETTIVDGSGDSDQVQGRVNQIRAEIDNSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SSVFEKLELTGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLAVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAGAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcattgcgttcaacgaggaggcccggcgcggtctcgagcgtggcatgaac
cagctcgccgacgccgtcaaggtcacccttggccccaagggtcgcaacgtcgtccttgag
aagaagtggggcgcgcccacgatcaccaacgatggcgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggcgacggtacgaccaccgccaccgtcctcgcccaggctctcgtccgc
gagggtctgcgcaacgtggccgccggtgccaacccgatggccctcaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctcgcgcaggccaaggacgtcgagaccaag
gagcagatcgcttccacggcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcggtctggagctcgaactcaccgagggcatgcgcttcgacaagggctacatctcggcc
tacttcgccaccgacatggagcgtatggaggcgtccctggacgacccgtacatcctgatc
gtcaactccaagatcggctcggtcaaggacctgctgccgctcctggagaaggtcatgcag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcacggtcatctcc
gaggaggtcggcctcaagctggagaacgccggtctcgacctgctcggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggctccggtgacagcgaccaggtc
cagggccgcgtcaaccagatccgcgccgagatcgacaactccgactcggactacgaccgc
gagaagctccaggagcgcctcgcgaagctggccggcggcgtggccgtcatcaaggccggc
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggcggtggcgtggccctgctgcaggcc
tcctcggtcttcgagaagctggagctcaccggtgacgaggcgaccggcgccaacgccgtg
aagctcgcgctggaggccccgctgaagcagatcgccgtcaacggtggtcttgagggtggc
gtcgtcgtcgagaaggtgcgcaacctggccgtcggccacggtctgaacgccgccaccggc
gagtacgtcgacatgatcgccgagggcatcatcgacccggcgaaggtcacccgctccgcg
ctgcagaacgcggcgtcgatcgcggccctcttcctcaccaccgaggccgtcatcgccgac
aagcccgagaaggccggtgcccccgcgggcggcggcatgccgggcggtgacatggacttc
tga
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