Streptomyces lavendulae subsp. lavendulae: SLAV_18150
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Entry
SLAV_18150 CDS
T05314
Name
(GenBank) RNA polymerase sigma factor
Organism
slx
Streptomyces lavendulae subsp. lavendulae
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ATZ25472
UniProt:
A0A2K8PFF4
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Position
4139202..4141175
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AA seq
657 aa
AA seq
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MSVDGRDGSLGGSGGEAGPGSLPPRQVPAQREPAGRHAAPRPGGADLPPSDADLIARMRG
GDDGAYEELFRRHSEAVRRYARTCCRDGHTADDLTAEVFARTLQAVRGGAGPDQSVRAYL
LTTVRRVAAAWGKTARREHLVEDFALFAEQAAAGTEGAGGLGGLGGDDGLELGADVRAMH
EAERSLAMQAFRSLPERWQAVLWHTTVEEASPSAIAPLFGLSANATAVLASRAREGLKQA
YLQAHVSSALSAGGDCARYADRLGAYARGGLRMRAERGLRKHLEECAKCRLAAGELKDVN
AGIPALLPVAVIGWFAAGYAAKAAGVVAGGAVAAGGAGAAAAAAGGSSAGAGAAGAGAGA
AGGTGGAGAGTGGAAAAEGLGLPAKAAIAAGIAVAAAAGVVFALVGDEPEPVRAAAKPAP
GVVAPAVPKPAASAAPETGAPAAPSPAAPKPGPPRRSPEPSAPASVPPSPSAAPAPAPAS
KPPSASPRPEPKPSPTPTPAPSPAKPSPKPPAAQDFQLARLGHSAYGQHTAPEVETWRSS
WVWQRWGLEVGGQRFGQGITVNSRSSVEITLNRQCTGFSARAGVDGLSLLTDGKLRFSVY
GDGQRLWRSGALGYGDAPADVRVSLAGHETLRLVVEQAGQGHLPTLASWADAVISCR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgacgggcgggacgggtccctcggtggctccggcggggaggccgggccgggg
agcctgcccccgcggcaggtgccggcccagcgcgaaccggcgggacggcacgccgctccg
cggccgggtggcgccgatctgcctccgtccgacgccgacttgatcgcccggatgcgcggt
ggtgacgacggtgcgtacgaggaactgttccgtcggcactccgaggccgtgcgccggtac
gcccgcacctgttgccgggacgggcacaccgccgacgacctgaccgccgaggtgttcgcg
cggacgctccaggccgtgcggggcggtgcggggcccgaccagtcggtgcgggcgtacctg
ctcaccaccgtgcggcgggtcgccgcggcctgggggaagaccgcccggcgggaacatctg
gtcgaggacttcgcgctgttcgcggagcaggccgcggccggtaccgagggcgcgggcggc
ctgggcgggctgggcggcgacgacggcctggagctgggcgcggacgtccgggcgatgcac
gaggccgagcggtcgctcgccatgcaggccttccggagcctgcccgagcggtggcaggcc
gtgctgtggcacaccacggtcgaggaggcttcgccgagtgcgatcgccccgctgttcggg
ctgagcgccaacgcgacggcggtgctggccagtcgggcccgggagggcctcaagcaggcc
tacctccaggcgcacgtgagttccgcgctgagcgcgggcggcgactgcgcccggtacgcg
gaccggctgggcgcctatgcccggggcgggttgcggatgcgggcggagcgggggctgcgc
aagcaccttgaggagtgcgcgaagtgccggctcgccgccggggagctgaaggacgtcaac
gccgggatccccgcgctgctgccggtcgcggtcatcgggtggttcgccgccgggtacgcc
gccaaggcggccggggtggttgcgggtggggccgtcgcggccggtggggcgggagccgct
gctgccgccgcgggcggttcctccgcgggggccggtgccgcgggtgcgggagcgggagcg
gccggagggaccgggggtgccggggcggggaccgggggtgccgctgccgccgaggggctg
gggctgcccgccaaggccgccatcgccgccgggatagcggtcgccgcggccgccggggtg
gtgttcgccctcgtcggggacgagcccgagccggtgcgggccgccgcgaagcccgcaccc
ggggtggtggccccggccgtgccgaagccggccgcgtccgcggctccggagaccggtgcg
cccgcggctccgtcaccggccgcgccgaaacccgggccgccccggcgctccccggagccc
tcggctcccgcatcggtgccgccgtcgccctcggctgccccggcaccggccccggcgtcg
aagccgccgtcggcctcgccccgacccgagccgaagccctccccgactccgacgcccgcc
ccgtcgcccgccaagccctcgccgaagcccccggcggcccaggacttccagctggcgcgg
ctcgggcactccgcgtacgggcagcacaccgcgccggaggtggagacctggcgcagcagc
tgggtgtggcagcggtgggggctggaggtgggcggtcagcggttcgggcagggcatcacg
gtgaactcccgttcctcggtggagatcaccctcaaccggcagtgcaccggcttctcggcg
cgggccggggtggacgggctgtcgctgctgaccgacgggaagctgcggttctccgtctac
ggcgacggacagcggctgtggcggtcgggcgcgctcgggtacggcgacgccccggcggac
gtccgggtgtccctggccgggcacgagacgctgcggctggtggtggaacaggccgggcag
gggcacctgccgacgctggcgagctgggcggacgcggtgatcagctgccgctga
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