Streptomyces lavendulae subsp. lavendulae: SLAV_18585
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Entry
SLAV_18585 CDS
T05314
Symbol
sigF3
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slx03021
]
SLAV_18585 (sigF3)
Transcription machinery [BR:
slx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLAV_18585 (sigF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
MarR
NirdL-like_HTH
HTH_3
DUF134
DUF7343
HTH_37
HTH_Tnp_4
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ATZ25547
UniProt:
A0A2K8PFN6
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All DBs
Position
4227111..4227950
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AA seq
279 aa
AA seq
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MPHPQEPREEPHEEPPSPPAAPRPQSRGADTRALTQVLFGQLKGLQPGTREHERVRGALI
EANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAMPTVVGEIK
RYFRDNVRTVHVPRRLHELWVQVNAATEDLTTLHGRTPTTPEIAERLRISEDEVLSCIEA
GRSYHATSLEAAQEGDGMPGLLDRLGYEDPELAGVEHRDLVRHLLVQLPEREQRILLLRY
YNNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgccccacccgcaggagccccgcgaggagccgcacgaggaacccccctcccctccggcc
gccccgcggccgcaaagccggggggccgacacccgggccctcacccaggtcctcttcggg
cagctgaagggcctccagccgggcaccagggagcacgagcgggtgcgcggggccctgatc
gaggcgaacctcccgctcgtccgttacgcggccgcccgcttccgcagccgcaacgagccg
atggaggacgtggtccaggtcggcacgatcggcctgatcaacgcgatcgaccggttcgac
ccggagcgcggggtccagttccccaccttcgccatgcccacggtggtcggcgagatcaaa
cgctacttccgggacaacgtccgcaccgtccacgtcccgcgccgcctccacgagctgtgg
gtgcaggtcaacgccgccaccgaggacctcaccaccctccacggccggaccccgaccacc
ccggagatcgccgagcggctgcggatcagcgaggacgaggtgctgtcctgcatcgaggcc
ggccgcagctaccacgcgacctcgctcgaagccgcccaggagggcgacgggatgcccggc
ctgctcgaccggctcggctacgaggacccggagctggccggggtcgaacaccgagacctc
gtacgccacctgctcgtacaactgcccgagcgcgagcagcggatcctgctcctgcggtac
tacaacaacctcacgcagtcgcagatcagtgccgagctgggggtctcccagatgcacgtg
tcgcggctgctcgcgaggagcttcgcccgtctgagatccgcaaacaggatcgaggcttaa
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