Streptomyces lavendulae subsp. lavendulae: SLAV_18590
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Entry
SLAV_18590 CDS
T05314
Symbol
sigF4
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slx03021
]
SLAV_18590 (sigF4)
Transcription machinery [BR:
slx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLAV_18590 (sigF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ATZ25548
UniProt:
A0A2K8PGD4
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Position
4228184..4229032
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AA seq
282 aa
AA seq
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MSVDQGSSKVLTLVKREVPAAPAAHDRSEAIDTRTLSRSLFQRLAALDADSPERAYVRDT
LIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGE
IKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAAVLGVSEEEVVDGL
AVGNAYTASSLDSPSPEDEGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQII
MLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRVGLIGE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaccagggcagctccaaggtgctcacgctcgtcaagcgtgaggtgccggca
gcacccgcggcgcacgaccgctcggaagccatcgacacccggacactctcccgctccctc
ttccagcgcctggccgcactggacgcggacagccccgaacgggcgtacgtacgcgacacc
ctgatcgagctgaacctgccgctggtgcgctacgcggcggcgcggttccgcagccgcaac
gagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgg
ttcgactgcgaacgcggcgtggagttcccgacgttcgcgatgccgaccgtcgtgggcgag
atcaaacgattctttcgagacacttcctggtccgtccgcgtcccgcgccggctccaggag
ctgcgcctggcgctgaccaaggccagcgacgagctcgcccagaagctggaccggtccccg
accgtgccggaactggcggccgtgctcggcgtctccgaggaggaggtcgtcgacggtctg
gccgtcggcaacgcctacaccgcctcctcgctcgactcgccctccccggaggacgagggc
ggcgagggctcgctcgcggaccggctcgggtacgaggacaccgcgctcgaaggggtcgag
taccgggagtccctcaagccgctgctcgccaaactcccgcccagggagcggcagatcatc
atgctccgcttcttcgcgaacatgacccagtcgcagatcggcgaggaggtcggcatctcc
cagatgcacgtctcccggctgctgacgcggacgctcgcgcagctgcgcgtgggcctgatc
ggggagtga
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