Streptomyces lavendulae subsp. lavendulae: SLAV_23595
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Entry
SLAV_23595 CDS
T05314
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_23595 (vsr)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SLAV_23595 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
DsrC
Motif
Other DBs
NCBI-ProteinID:
ATZ26526
UniProt:
A0A2K8PIG3
LinkDB
All DBs
Position
complement(5300683..5301150)
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AA seq
155 aa
AA seq
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MPDESSWQPPEGSWASSAARRRNMQAIRSRDTKPELVIRRLVHARGLRYRIAARPLPGLR
RTADLVFRPAKVAVFIDGCYWHGCPEHYVSPKTNPGYWSEKVARNMARDRDTDRQLEEAG
WLVLRFWEHEQSDVCAAAVAAAVQERRGHRQAPGS
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgagagttcctggcagcctccagagggttcctgggcgtcctcagcagcccgc
cgccgcaacatgcaggcgatccggagccgtgacacgaagcccgagctcgtcatcaggcgc
ctcgtgcacgccagaggtctgcgctaccgcatcgctgcccgccctctgcccggtctgcgc
agaacggccgacctggtcttccggccagcgaaggtagcggtcttcatcgacgggtgctac
tggcacggctgcccggaacactacgtgtctccgaagaccaacccgggctactggtccgag
aaggtggcacggaacatggcaagggaccgggatacggaccggcagctcgaagaggcaggc
tggctcgtgctccggttctgggagcacgagcagtctgacgtctgcgctgccgcggtggcc
gccgccgtgcaggagcgccgcggccaccgccaggcaccgggctcctag
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