Streptomyces lavendulae subsp. lavendulae: SLAV_24900
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Entry
SLAV_24900 CDS
T05314
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SLAV_24900 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_24900 (recO)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SLAV_24900 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SLAV_24900 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ATZ26777
UniProt:
A0A2K8PJ80
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All DBs
Position
5598695..5599441
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AA seq
248 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGAGLEPFSHADVQ
FFARGSELIGRSLPLCTQTEIIAPYGNGIVTDYARYTAGTAMLETAERFTENEGEPSVQQ
YLLLVGALRTLARGEHEPHLILDAFLLRSLAVNGYAPSFEDCAKCGIHGPNRHFSVAAGG
VICADCRVPGSVVPSSEAIALLSALLTGDWKHADACEARHVREGSGLVSAYLHWHLERGL
RSLRYVEK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggtgaggcggac
cgcatcatcacgctgctcacccgcggtcacggccgcgtacgggccgtcgcccgcggggtg
cgccgtacgaagtccaagttcggcgccgggctggaacctttctcccacgccgacgtgcag
ttcttcgcccgcggcagcgagctgatcggccgcagcctgccgctgtgcacccagaccgag
atcatcgccccctacggcaacggcatcgtcaccgactacgcccgctacaccgccggcacc
gcgatgctggagaccgccgaacgcttcaccgagaacgagggcgaaccctccgtccagcag
tacctgctgctggtcggcgccctgcgcaccctcgcacgcggcgaacacgaaccccacctc
atcctcgacgccttcctgctgcgctccctcgccgtcaacggctacgcgcccagcttcgag
gactgcgcgaagtgcgggatccacggccccaaccggcacttctccgtcgccgcgggcggg
gtcatatgcgcggactgccgcgtccccggctccgtcgtaccctcgtcggaggccatcgcc
ctgctcagcgcgctgctgacgggagactggaaacacgcggacgcctgcgaggcgcgccac
gtgcgggagggcagcgggctggtctcggcctatttgcactggcatctggagcgcgggcta
cgctccctgcgatacgtcgagaaatag
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