Streptomyces lavendulae subsp. lavendulae: SLAV_26645
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Entry
SLAV_26645 CDS
T05314
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SLAV_26645 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_26645 (nfo)
Enzymes [BR:
slx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SLAV_26645 (nfo)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SLAV_26645 (nfo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ATZ27121
UniProt:
A0A2K8PK58
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All DBs
Position
complement(5975981..5976841)
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AA seq
286 aa
AA seq
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MTRNPVGGHVPVAGGLASVGLPYAREMGAEALQVFVANPRGWATPTGNPAQDELFRTQCA
EESLPVYVHAPYLINFGSHNAATVEKSVESLRHSLRRGREIGALGVVVHTGSATGGRPRE
EAYAQVREHMLPLLDELTHEDDPFLLLESTAGQGFSLCSRTWDFGPYFEALDHHPRLGIC
LDTCHIFAAGHDLAEPGGTKQTLDLLVDTVGPGRLKLIHANDSKEGVGAHKDRHANIGQG
HIGREAFAELCSHPETEGVPLIIETPGGKEGHAADVALLKELRGVH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcaatcccgtgggcgggcacgtgcccgtcgccggcggcctcgcctcggtcggc
ctcccgtacgcccgtgagatgggcgccgaggccctccaggtcttcgtcgccaatccgcgc
ggctgggccacgccgaccggcaacccggcacaggacgagctgttccggacgcagtgcgcc
gaggagtccctcccggtgtacgtccacgccccgtacctgatcaacttcggctcgcacaac
gcggcgacggtggagaagtcggtggagtcgctgcgccactcgctgcgccgaggccgggag
atcggcgcgctcggcgtggtcgtgcacaccggctcggcgaccgggggccgcccgcgcgag
gaggcgtacgcgcaggtcagggagcacatgctgccgctgctggacgagctgacgcacgag
gacgacccgttcctgctgctggagtccaccgccggtcagggcttctcgctctgctcccgg
acctgggacttcgggccctacttcgaggcgctcgaccaccacccccggctcggcatctgc
ctggacacctgccacatcttcgcggcgggccacgacctggccgagccgggcggcaccaag
cagacgctggacctgctggtggacacggtggggccgggccggctgaagctgatccacgcc
aacgactccaaggagggcgtcggcgcgcacaaggaccggcacgccaacatcggccagggc
cacatcggccgggaggccttcgcggagctgtgctcgcaccccgagacggagggggtgccg
ctgatcatcgagacgcccggcggcaaggaggggcacgccgccgacgtggccctgctgaag
gagctgcgcggcgtccactga
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