Streptomyces lavendulae subsp. lavendulae: SLAV_28235
Help
Entry
SLAV_28235 CDS
T05314
Symbol
polC2
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03030
DNA replication
slx03430
Mismatch repair
slx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLAV_28235 (polC2)
03430 Mismatch repair
SLAV_28235 (polC2)
03440 Homologous recombination
SLAV_28235 (polC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slx03032
]
SLAV_28235 (polC2)
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_28235 (polC2)
Enzymes [BR:
slx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLAV_28235 (polC2)
DNA replication proteins [BR:
slx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLAV_28235 (polC2)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLAV_28235 (polC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATZ27437
UniProt:
A0A2K8PL20
LinkDB
All DBs
Position
complement(6308816..6309793)
Genome browser
AA seq
325 aa
AA seq
DB search
MLDDRTTADTTWPTAYPEGYAVVDVETTGLARDDRIVSAAVYRLDARGEVEDHWYTLVNP
RRDPGPVWIHGLTSEMLADAPLFEDIAEEFAERLADRVLVAHNAIFDWQMIAREYARASR
TAPVRQRLCTIALSKELDLPLPNHKLESLAAHYGVVQQRAHHALDDARVLAEAFRPSLHT
AARGGVRLPLLECRALTEWSDSPATPRIGYQASYGGSGTWRASRKRPPCPYPNPGRFEDG
TGLKQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSVSRLTSLLVTNDPDSSTSKTVKAK
AFGTPVVDEAAFTQLLRDVAPAQES
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaccgtacgaccgcagacacgacgtggccgaccgcgtaccccgaggggtac
gcggtcgtcgacgtggagaccaccgggctcgctcgtgacgaccggatcgtgtccgcggcc
gtctaccggctcgacgcccggggcgaggtggaggaccactggtacaccctggtcaacccg
cgccgggacccggggccggtctggatccacgggctcaccagcgagatgctcgccgacgcg
cccctcttcgaggacatcgccgaggagttcgcggagcggctcgcggaccgggtgctcgtc
gcgcacaacgccatcttcgactggcagatgatcgcccgggagtacgcgcgggcctcccgg
accgcgccggtgcgccagcggctgtgcaccatcgccctgtcgaaggaactggacctgccg
ctgcccaaccacaagctggagtcgctcgccgcgcactacggcgtggtccagcagcgcgcc
caccacgcgctggacgacgcccgggtgctggcggaggccttccgtccgtcgctgcacacg
gccgcgcggggcggcgtacggctgcccctgctggagtgccgggcgctgacggagtggtcg
gactcccccgccacgccccggatcggctaccaggcctcgtacggcggctccggcacctgg
cgggcctcgcgcaagcggccgccgtgcccgtaccccaacccggggcgcttcgaggacggc
accgggctcaagcagggcatgcgggtcgccttctcgggtgacacctcggtggaccgggag
ctgctggaggaccgggcggtggaggcgggcctgcacgtcgcgacgagcgtgtcgcggctc
accagcctgctggtgaccaacgaccccgactcgtcgacctcgaagacggtcaaggcgaag
gccttcggcaccccggtggtggacgaggcggccttcacccagctgctgcgggacgtggcg
cccgcgcaggagtcgtag
DBGET
integrated database retrieval system
