Streptomyces lavendulae subsp. lavendulae: SLAV_29910
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Entry
SLAV_29910 CDS
T05314
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SLAV_29910 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_29910 (ruvB)
Enzymes [BR:
slx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLAV_29910 (ruvB)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SLAV_29910 (ruvB)
RecFOR pathway proteins
SLAV_29910 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
nSTAND3
Mg_chelatase
Sigma54_activat
DUF815
AAA_14
AAA_3
Sigma54_activ_2
RNA_helicase
TsaE
Zeta_toxin
AAA_28
AAA_18
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ATZ27759
UniProt:
A0A2K8PM19
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All DBs
Position
6670756..6671829
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AA seq
357 aa
AA seq
DB search
MNGYDETDIPEPDRLVAPGADGEDTAVEAALRPKDLGEFVGQEKVRQQLDLVLKAAKQRG
ATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVLFL
DEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLR
DRFGFTGHMEFYAPEELERVVHRSARLLDVEIDTAGAAEIAGRSRGTPRIANRLLRRVRD
YAQVRADGVITREVAGTALQVYEVDARGLDRLDRAVLEALLKLFGGGPVGLSTLAVAVGE
ERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLVPPQQAGGGPRGQQGLFGA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgggtacgacgagaccgacatccccgagccggaccggctcgtcgcgcccggcgcc
gacggcgaggacaccgccgtcgaggcggccctgcgccccaaggacctcggtgagttcgtc
ggccaggagaaggtccgccagcagctcgacctcgtcctcaaggcggccaagcagcgcggc
gccaccgccgaccacgtcctgctctccggcgcgcccggcctcggcaagaccaccctctcc
atgatcatcgccgccgagatgggggcgccgatccggatcacctccggcccggccatccag
cacgccggcgacctcgccgccatcctctcctccctccaggagggcgaggtgctcttcctc
gacgagatccaccgcatgtcccggcccgccgaggagatgctgtacatggccatggaggac
ttccgcgtcgacgtgatcgtcggcaagggccccggggcgaccgccatcccgctggagctg
ccgcccttcaccctcgtcggggcgacgacccgggccggcctgctgcccccgccgctgcgg
gaccgtttcggcttcaccggccacatggagttctacgcccccgaggagctggagcgggtc
gtccaccgctccgcccgcctcctcgacgtggagatcgacaccgccggcgccgccgagatc
gccggacgctcccgcggcacgccccgcatcgccaaccgcctcctgcgccgcgtccgcgac
tacgcccaggtgagggccgacggggtgatcacccgcgaggtggccggaaccgccctccag
gtctacgaggtggacgcgcgcgggctcgaccggctggaccgggcggtgctggaggccctg
ctcaagctgttcggcggcggccccgtcggcctctccaccctcgcggtggcggtcggcgag
gagcgggagaccgtcgaggaagtggccgaacccttcctggtccgagaaggactgctggcg
cgtaccccgcgcgggcgggtcgccacccccgccgcatgggctcacctggggcttgtcccc
ccgcagcaggccggcggcggaccaaggggacaacagggcttgttcggggcctga
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