Streptomyces lavendulae subsp. lavendulae: SLAV_31110
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Entry
SLAV_31110 CDS
T05314
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_31110 (sbcD)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SLAV_31110 (sbcD)
Archaeal homologous recombinant proteins
SLAV_31110 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ATZ27995
UniProt:
A0A2K8PQV8
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Position
6923444..6924628
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AA seq
394 aa
AA seq
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MKFLHTSDWHLGRSFHRVNLLGAQAAFVDHLVETVREHRVDAVLVSGDVYDRAVPPLPAV
ELYDRALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTDPAGCADPVVLADV
HGDVALYGLPYLEPALVKDEFGAPKVSHEAVLGAAMDRIRADLADRAPGTRSVVLAHAFV
TGGQASDSERDIAVGGVEAVPAAVFDGIDYAALGHLHGCQTINERVRYSGSPLAYSFSEA
DHRKTMWLVELGPAGEVTAERIDTPVPRPLARLRGRLEDLLADPALAGREDSWVEATLTD
PVRPEDPMARLATRFPHTLSLAFDPEGREEDGTASYAQRLRGRSDQEIAEDFVAHVRGGG
GADEAERGVLRAAFDEVRVQSSREDREHRQESAR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcctgcacacctccgactggcacctgggccggtccttccaccgcgtgaacctg
ctcggagcccaggccgccttcgtcgaccacctcgtcgagacggtccgggagcaccgggtc
gacgccgtcctcgtctccggggacgtctacgaccgggccgtgcccccgctgcccgccgtc
gagctctacgaccgggcgctgcaccggctcgccgacctcggcgtgcccacggtgatgatc
tccgggaaccacgactcggcccgccgtctcggggtcggcgccgggctgatcggccgggcc
gggatccacctcaggaccgacccggccggctgcgccgaccccgtggtgctggccgacgta
cacggtgacgtggccctctacgggctgccgtacctggaaccggctctggtcaaggacgag
ttcggcgcgccgaaggtgagccacgaggcggtgctgggcgcggccatggaccggatccgg
gccgacctggccgaccgggcccccggcacccgctccgtggtcctcgcccacgccttcgtc
accggcgggcaggccagcgacagcgagcgcgacatcgccgtcggcggggtcgaggccgtg
cccgcggccgtcttcgacgggatcgactacgccgccctcggccacctccacggctgccag
acgatcaacgaacgggtccgctactccggttccccgctcgcctactccttctccgaggcc
gaccaccgcaagaccatgtggctggtcgagctcggcccggccggcgaggtcaccgccgag
cggatcgacaccccggtgccgcgcccgctcgcccggctgcgcggccgcctggaggacctc
ctggccgatcccgcgctggccggccgcgaggacagctgggtcgaggccaccctcaccgac
ccggtccgccccgaggaccccatggcccggctcgccacccgcttcccccacaccctcagc
ctcgccttcgaccccgaaggccgcgaggaggacggcacggcctcctacgcccagcgcctg
aggggccgcagcgaccaggagatcgccgaggacttcgtcgcccacgtgcgcggcgggggc
ggcgccgacgaggccgagcggggcgttctgcgcgccgccttcgacgaggtgcgcgtccag
agctcccgcgaggaccgggaacaccgtcaggagagcgcccgatga
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