Streptomyces lavendulae subsp. lavendulae: SLAV_32145
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Entry
SLAV_32145 CDS
T05314
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_32145 (phrB)
Enzymes [BR:
slx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SLAV_32145 (phrB)
DNA repair and recombination proteins [BR:
slx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SLAV_32145 (phrB)
Prokaryotic type
SLAV_32145 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ATZ28201
UniProt:
A0A2K8PN87
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All DBs
Position
7162572..7163957
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AA seq
461 aa
AA seq
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MNTAVVLYTSDLRLHDHPPLRAALSSGDQVVPLFVRDRVIEDSAFAAPNRLAFLADCLAD
LDAALRDRGGRLLLRSGDVVAEVCALVQEADADEVHMAAGVSGYAHAREERLREALEAQG
RRLYVHDTVVTAVAPGAVLPSGSGADHFAVFTPYLRRWTELPLRPAEPAPRAVRVPEDLG
SEPLPRRSAVTGTSPGLARGGETEARRLLTNWLRSGITRYEDTHDDLAGDATSKLSPHLH
FGTLSPTEAVHRARAAGGPGAEAFVRQLCWRDFHHQVLAARPETAAEDYRARQDRWRTGP
DAEEEIQAWKDGRTGYPVVDAAMRQLRHEGWMHNRGRLLAASFLAKTLYVDWRTGARHFM
DLLVDGDVANNQLNWQWVAGTGTDTRPNRVLNPVRQGLRYDPEGRYVHRWVPELAGLPAP
RVHEPWRLPGLERARFDYPDPVVDLADGLGRFREGRPGAVS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgccgtggtcctgtacacctccgacctgcgcctgcacgaccatccacccctg
cgggccgccctctcctccggcgaccaagtcgtcccgctcttcgtccgcgaccgcgtcatc
gaggactccgccttcgccgcgcccaaccggctggccttcctcgccgactgcctcgccgac
ctcgacgccgccctgcgcgaccgcggaggccgcctcctgctgcgctccggggatgtcgtc
gccgaggtctgcgccctcgtccaggaggccgacgccgacgaggtgcacatggccgccggg
gtcagcggctacgcccacgcccgcgaggaacgcctgcgcgaggccctcgaagcccaggga
cggcgcctctacgtccacgacaccgtcgtcaccgccgtggccccgggagcggtgctgccc
tccggctccggagccgaccacttcgccgtcttcaccccgtacctgcgccgctggacggaa
ctgcccctcaggccggccgagcccgcgccccgcgccgtacgggtacccgaagacctcggc
tccgagccgctgccccgccgctccgccgtcaccggcacctccccgggcctcgcccgaggc
ggcgagaccgaggcccgcaggctgctcaccaactggctgcgctccggcatcacccgctac
gaggacacccacgacgacctcgccggagacgccacctcgaagctctccccgcacctgcac
ttcggcaccctctcgcccaccgaggccgtccaccgcgcccgcgccgccggcggccccggc
gccgaggccttcgtccgccagctgtgctggcgcgacttccaccaccaggtcctcgccgcc
cgccccgaaaccgccgccgaggactaccgggcccgccaggaccgctggcgcaccggaccc
gacgccgaggaggagatccaggcctggaaggacggccgcaccggctacccggtcgtcgac
gcggccatgcgccagctgcgccacgagggctggatgcacaaccggggccgcctgctggcc
gccagcttcctcgccaagaccctctacgtggactggcgcaccggagcccgccacttcatg
gacctcctcgtcgacggggacgtggccaacaaccagctcaactggcagtgggtggccggc
accggcaccgacacccgccccaaccgggtcctcaaccccgtccgccagggcctgcgctac
gaccccgagggccgttacgtccaccgctgggtgcccgaactcgccggcctgcccgcgccc
cgcgtccacgagccctggcggctgcccggcctggaacgggcccgcttcgactacccggac
cccgtcgtggacctcgccgacggcctcggccgcttccgcgaggggcggcccggcgccgta
tcgtga
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