Streptomyces lavendulae subsp. lavendulae: SLAV_33245
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Entry
SLAV_33245 CDS
T05314
Name
(GenBank) RNA ligase
Organism
slx
Streptomyces lavendulae subsp. lavendulae
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Gene cluster
GFIT
Motif
Pfam:
RNA_ligase
AAA_33
AAA_24
AAA_22
ABC_tran
AAA_18
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATZ28421
UniProt:
A0A2K8PNW5
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Position
complement(7412328..7414139)
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AA seq
603 aa
AA seq
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MRTHYPRTAHLPWSPGATPDDVRASGPSALAGREVVVTEKLDGENTTLYRDGLHARSLDS
GHHPSRAWVKGLQGRIGSGIPEGGRVCGENLYARHSLAYEELDSWFYGFSVWDGDHCLDW
DGTVRFLRRLGVPTPRVLWRGVYDERALRRLRVDTTRQEGYVVRTTAGFRREDFGRCVAK
WVRGGHVQTDTHWMYAPVVPNGLGANAPLWAVRSGSEPDVAGLLAAVGSGPDRAGGRDGH
GDADPDAAADAAAAGVGRAVAEVTARLDGAGRTGDARLAGVLAAALHREHRAALGARLAA
GPLGMATARRVADLVGLYPALRRPFPDEERRAGLVRMAAAADVGVLHALAAALPGGEDDP
GARECVEWSALYAEEAGLLGPDPLGGLRTGLREALAGLDGDAADRCWAEAREAYGRGALS
TPEEAVAATWRWRDAGTFPRLVQLCGPSGSGKSTFARGLPGTDAYVSLDDLRSARGARAD
QRANPEVLREGLERLDRALAAGGTVVWDATSLTERQRGLAGALARRRNALVTQVVVLVGE
AELVRRNAVRPHPVPGTVMEAQLRRFAPPYPGEAHRTWYVGAGGAVEDTAGGAGPSRGEG
EGV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgcactacccccgtacggcgcacctgccgtggtccccgggagccacgccggac
gacgtgcgcgcgagcgggccgtcggcgctggccgggcgggaggtggtcgtcaccgagaag
ctcgacggggagaacaccaccctctaccgggacggcctccacgcccgctccctcgactcg
ggacaccacccgtcacgcgcctgggtcaagggactccagggccggatcggctccggcata
cccgagggcgggcgggtgtgcggggagaacctctacgcccgccattcgctcgcctacgag
gaactcgacagctggttctacgggttctccgtatgggacggcgaccactgcctcgactgg
gacgggaccgtgcgcttcctgcgccggctcggcgtccccacgccgcgcgtgctctggcgg
ggtgtctacgacgaacgcgcgctgcgccggctgcgggtcgacaccacccgccaggagggc
tacgtcgtccgcacgacggcgggcttccggcgcgaggacttcggccgctgcgtggccaag
tgggtccgcggcggccacgtacagaccgacacccactggatgtacgcccccgtcgtcccg
aacgggctcggcgcgaacgccccgctgtgggcggtccgttcgggctcggagccggacgtg
gccgggctgttggccgcggtcggatccggcccggaccgggccggggggcgcgacgggcac
ggcgacgcggacccggacgccgccgcggacgccgccgcggccggtgtcgggcgcgccgtc
gccgaggtcaccgcccggctcgacggcgcgggccgcaccggggacgcccggctggccggg
gtcctggccgccgcgctgcaccgcgaacaccgggccgccctcggcgcgcggctcgcggcg
gggccgctgggaatggcgaccgcccgtcgggtggccgacctggtcgggctgtacccggcc
ctgcggcggccgttcccggacgaggaacggcgggccgggctggtccggatggcggcggcg
gccgacgtcggggtactgcacgcactggcggcggcgctgccgggcggggaggacgacccc
ggggcgcgggaatgcgtcgagtggtccgcgctgtacgccgaggaggcgggcctgctcggc
ccggaccccctgggcggactgcggaccgggctgcgggaggctctggccggtctggacggg
gacgccgccgaccgctgttgggcggaggcccgcgaggcctacgggcggggcgcgctgtcc
acccccgaggaggcggtggcggcgacctggcgctggcgcgacgccggcaccttcccgcgg
ctggtgcagctgtgcggcccctcgggcagcgggaagagcaccttcgcacggggcctgccg
ggaacggacgcgtacgtcagcctggacgacctgcgctccgcccgcggtgcgcgcgccgac
cagcgggccaacccggaggtgctgcgcgaggggctggagcggctggaccgggcgctggcg
gcgggcggcaccgtggtgtgggacgccacctccctgacggaacgccagcgcggcctcgcc
ggtgcgctggcacggcgccggaacgcgctggtcacccaggtggtcgtactggtcggggag
gcggaactggtgcggcgcaacgccgtgcgcccccaccccgtgcccgggaccgtaatggag
gcgcagctgcgccggttcgcccctccctacccgggggaggcgcaccgcacctggtacgtg
ggcgcgggcggcgcggtggaggacacggcgggcggcgcggggccctcgcgcggcgaaggg
gagggcgtctga
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