Streptomyces lavendulae subsp. lavendulae: SLAV_38105
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Entry
SLAV_38105 CDS
T05314
Symbol
ykoV2
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SLAV_38105 (ykoV2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_38105 (ykoV2)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SLAV_38105 (ykoV2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
ATZ29385
UniProt:
A0A2K8PUP3
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Position
complement(8418810..8419796)
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AA seq
328 aa
AA seq
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MARPLWTGNLSFGLVSLPVGLYTATDSHTIHLHQLQRGTSDRIRNRRVNERTGKEVELDD
IVKGYDTGADEYVLVEPAELDEIAPGRSRALDITGFVDLDEVEPIFFDKTYYLGPRGSEY
GKIYSLLEQALAKAGKAGITTFVMRQHEYLVAVKAEDGLLTLHTLHWADEIRDPKKEIDS
LPGKAKATAKELQMAEQLIRAMSMTWDPGEFHDTFQKKVTALIEAKKAGETVEKAEPAAE
PTGVVDLMEALRASVERASSPKTTGGKATVTGKTGAEKKPAAKKRIRSAQKEDLTALPKA
DLYKKAAAANVAGRSNMTRDDLVKALSQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgacctctgtggacgggaaatctgtcgttcggcctggtcagcctgccggtaggc
ctctacaccgccaccgacagccacaccatccacctccaccagctccagcgcggcacctcc
gaccggatccgcaaccgccgggtcaacgagcgcaccggcaaagaggtcgagctcgacgac
atcgtcaagggctacgacaccggcgcagacgagtacgtcctggtggaacctgcggagctt
gatgagatcgccccaggccgctcccgcgctctggacatcaccggtttcgtggacctggac
gaggtcgagccgatcttcttcgacaagacctactacctcggcccccgcggcagcgagtac
ggcaagatctacagcctcctggaacaggccctcgcaaaggccggcaaggccggcatcacc
acattcgtgatgcgccagcacgagtacctggtcgccgtgaaggccgaagacggcctcctg
accctgcacaccctgcactgggctgacgagatccgtgacccgaagaaggagatcgacagc
ctgccaggcaaggcgaaagccacggccaaggaacttcagatggccgaacagctcatccgc
gccatgagtatgacctgggaccccggcgagttccacgacacattccagaagaaggtcacc
gctctcatcgaggcaaagaaggccggcgagacggtcgagaaggcggaacccgccgccgag
ccgaccggcgttgttgacctcatggaggccctgcgcgccagcgtcgagcgcgcctcaagc
ccgaagaccacgggcggcaaggccacggtcaccgggaagaccggggccgagaagaaaccg
gcggcgaagaaacggatccgctccgcccagaaggaagacctgacagccctgccgaaggcc
gacctctacaagaaggcggccgccgcgaacgtcgccggccgctcgaacatgacccgcgac
gatctggtgaaggcgctgtcccaatga
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