Solanum lycopersicum (tomato): 100125910
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Entry
100125910 CDS
T02665
Symbol
MLH1
Name
(RefSeq) MLH1 protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03430
Mismatch repair
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100125910 (MLH1)
03460 Fanconi anemia pathway
100125910 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
100125910 (MLH1)
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100125910 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100125910
NCBI-ProteinID:
NP_001234641
UniProt:
A0A097PJP2
A5H619
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Position
4:complement(36203971..36243415)
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AA seq
727 aa
AA seq
DB search
MEDEAIPVPIPKEPPKIQRLEECVVNRIAAGEVIQRPVSAVKELIENSLDADSTSISVVV
KDGGLKLIQVSDDGHGIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFRGEALASMTYVG
HVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMAARRKTLQNSAD
DYPKIVDIISRFGIHHTHVSFSCRKHGAGRADVHTIATSSRLDAIRSVYGASVARDLMNI
EVSDTGPLISVFKMDGFISNSNYIAKKTTMVLFINDRLIDCGALKRAIEIVYTATLPKAS
KPFIYMSIILPPEHVDVNIHPTKREVSFLNQEFVIEKIQSVVGSKLRSSNESRTFQEQTM
DLSSSGPMATSKDSTKESSPSGIKSQKVPHKMVRTDTLDPSGRLHAYMQMKPPGNSERGP
CFSSVRSSIRQRRNPSDTADLTSIQELVNEIDNDCHPGLLDIVRNCTYTGMADEIFALLQ
HNTHLYLVNVINLSKELMYQQVLRRFAHFNAIQLSEPASLPELVMLALKEEGTDPEGNES
KELRGKIAEMNTELLKQKAGMLEEYFSIHIDSNGNMSSLPVILDQYTPDMDRIPEFILCL
GNDVDWEDEKICFQTIAAVLGNFYAMHPPLLPNPSGDGLKFYRKRVLSSGSEVTSIDNIE
NDTTEAEFDEELRLEAENAWAQREWSIQHVLFPSLRLFFKPPTSMVTNGTFVQVASLEKL
YRIFERC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagccattccagtgccgattccgaaggagccaccgaagattcagcggctg
gaagaatgtgtggtgaacagaatagcggctggcgaagtcatccaaaggccagtctctgcc
gtgaaagagctcattgagaacagcctggatgctgattccacctctatttccgttgttgtt
aaggatggcggtcttaaacttatccaagtttccgacgatggccatggaatccgttatgaa
gatttgccaattttatgcgagaggtatactacgtccaagctgagtaaatttgaagatttg
cagtccattaggtcgatgggatttagaggagaagccttggctagcatgacatatgtgggt
cacgtcactgtcaccaccattactatgggccagttgcatggatacagggcaacatataga
gatggtttgatggtggatgagccaaaggcttgtgctgctgtcaagggtacccagataatg
attgaaaatttattttataacatggctgcacgaaggaaaacccttcaaaattctgccgat
gactatccaaaaattgttgacattattagtaggtttggaattcatcacacacatgtgagc
ttctcttgtagaaagcatggagctggtagagcagatgttcacactattgctacttcttca
aggctcgatgcaattagatccgtttatggagcttcagttgctcgagatctgatgaatatc
gaagtttctgatactggtccattaatttcagtttttaagatggatggtttcatctccaac
tctaattatattgcgaagaagacaacaatggtgctttttataaatgatagactcattgat
tgtggtgctttgaagagggcaattgaaatagtctatactgcaacattgcctaaagcatca
aaacctttcatatacatgtcaatcattttgccgcccgagcatgttgatgtgaatatacac
ccaacaaagagagaggtaagctttttgaatcaagagttcgtcattgagaagatccagtct
gtagtagggtcaaaattgagaagctccaatgagtcgaggacattccaggaacagactatg
gatttatcttcatctggtccaatggccacaagtaaagattccactaaagaatcgtctcct
tctgggataaagtcacaaaaagtgccacataaaatggtacgaacagatactttggaccct
tctggaaggctgcacgcttacatgcaaatgaagcctcctggtaattcagaaagaggtcct
tgctttagctctgtgaggtcttctatcagacaaaggaggaatcctagtgacaccgcagac
ctcactagcatccaagagctcgttaatgagattgataatgactgtcaccctggtctattg
gatattgttaggaattgcacatatactgggatggcggatgagatttttgctttgcttcaa
cacaatacacacctttatcttgttaatgtgattaacttgagtaaagagcttatgtatcag
caagttttacgtcggtttgcccatttcaatgcaattcaactgagtgaaccagcatcatta
cctgagttagtaatgcttgctctgaaagaagagggtacagatccagaaggcaatgaaagc
aaagagctaagaggaaagattgccgagatgaatacagaactgctcaagcaaaaggctgga
atgctagaggagtattttagtattcatatcgattcaaatggaaatatgtctagtcttcct
gttatactggatcagtacacacctgacatggaccgcatcccagaatttatactttgttta
ggaaatgatgttgactgggaggacgagaaaatttgttttcagacaattgctgctgtccta
ggaaatttttatgccatgcatccgccattattgcctaatccctcaggtgatggcttgaaa
ttctacagaaagagagtactttcaagtggttcagaagtaacttcaatagataacatagag
aatgataccacggaggctgaatttgacgaagaactacgtttggaggctgaaaatgcctgg
gctcaacgtgaatggtcaattcagcatgttctgtttccctccctcaggctcttcttcaag
ccccctacttccatggttacaaatggaacttttgttcaggttgcatcactggaaaagctc
tacagaattttcgagagatgttaa
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