KEGG   Solanum lycopersicum (tomato): 100313952
Entry
100313952         CDS       T02665                                 
Symbol
Xpo1
Name
(RefSeq) exportin 1
  KO
K14290  exportin-1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03008  Ribosome biogenesis in eukaryotes
sly03013  Nucleocytoplasmic transport
sly03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100313952 (Xpo1)
   03008 Ribosome biogenesis in eukaryotes
    100313952 (Xpo1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100313952 (Xpo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    100313952 (Xpo1)
   03009 Ribosome biogenesis [BR:sly03009]
    100313952 (Xpo1)
   03016 Transfer RNA biogenesis [BR:sly03016]
    100313952 (Xpo1)
   03036 Chromosome and associated proteins [BR:sly03036]
    100313952 (Xpo1)
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100313952 (Xpo1)
Ribosome biogenesis [BR:sly03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    100313952 (Xpo1)
  Pre-60S particles
    100313952 (Xpo1)
Transfer RNA biogenesis [BR:sly03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    100313952 (Xpo1)
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100313952 (Xpo1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom
Other DBs
NCBI-GeneID: 100313952
NCBI-ProteinID: NP_001234182
UniProt: D1MAF2
LinkDB
Position
3:complement(56083446..56098480)
AA seq 1075 aa
MAAEKLRDLSQPIDVSLLDATVAAFYGTGSKEERAAADHILRDLQNNPDMWLQVVHILSS
TQSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEASLRRERLYISK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSVSHRTELIRATLATLHAFLSWIPLGYIFESTLLEI
LLKFFPLPSYRNLTLQCLTEVAALNFGDFYNEQYIKMYTIFMGQLQSVLPPNTSIPEAYA
NGSNEEQAFIQNLALFFTSFFKSHIRVLESSQENIGALLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAAHHNLDNPAMTTNMMGLQMPLLSGMNDGLGAQLMQRRQLYSGPMSK
LRLLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSNQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVVVQVGENEPFVSELLTTLPTTIADLEPHQIHTFYESVGQMIQAEPDPQKRDEYLQ
RLMELPNQRWNEIIGQARQSVDYLKDQDVIRAVLNILQTNTSAASSLGTYFLPQISLIFL
DMLNVYRMYSELISTSIAQGGPYASRTSIVKLLRSVKRETLKLIETFLDKAEDQSHIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEAAFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFAALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLN
LLLAMLKNFQNSEFANQFYRTYYLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCMVVML
SEPLWDASTVPCSYPNNVEFVREYTIKLLSTSFPNMTAAEVTQFVSGLFDSTNDLPTFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMRSIPGLIAPNEIQDEMVDS
NT seq 3228 nt   +upstreamnt  +downstreamnt
atggcggcggagaagctgagagatttgagtcagcccattgatgtttcgttgcttgacgct
actgttgctgctttctatggaaccggatctaaggaagagagagctgcagcggaccatatt
ttgcgtgatttgcaaaataacccagatatgtggcttcaagtggttcacattctatcgagc
acacaaagcctgaatactaagttttttgctttgcaggttcttgagggtgttattaagtat
agatggaatgcattgcctgtcgagcaacgagatggaatgaaaaactatatttctgaagtt
attgtcaagctttccagtgatgaagcatctctccggcgggaaaggctgtatattagcaag
ctaaacataattttggttcagattttgaagcacgagtggcctgcaagatggcgaagcttc
attcccgacttagttgcggctgcaaagacaagcgaaacaatatgtgaaaactgcatggca
atattgaagcttctcagcgaggaggttttcgatttctcaaggggtgaaatgactcaacaa
aagatcaaggagctcaaacaatctttaaacagcgagtttcaactcatccatgagctatgc
ttgtatgtgctatcagtatcccacagaactgagctcatcagggcgacgcttgctacactg
catgctttcctttcatggattccgcttggctatatttttgaatcaacactgttggaaata
ctgcttaaatttttcccattgccatcttatcgcaatctcacacttcagtgtctaacagag
gttgctgcccttaattttggggatttttataatgaacagtatatcaagatgtacaccata
ttcatggggcagttgcagagtgttcttccacctaatacaagcattccagaggcctatgca
aatggaagtaacgaagaacaggccttcattcagaatctggctctgttttttacatcattt
tttaagtctcatatacgtgtgctagaatcatcacaagagaatataggtgccctcttggtg
ggacttgagtatcttattaatatctcttatgtggatgatacagaagtttttaaggtttgc
ttggactactggaattccttagttcttgagctgtttgaagcagcacatcataatcttgat
aatcctgcaatgactacaaacatgatgggccttcagatgccactgctttctggcatgaat
gatggtcttggagcacaacttatgcagaggagacagctttattctggtccaatgtccaag
ttgaggttacttatgatatcacgcatggcaaaacctgaagaagttctcattgtcgaagat
gaaaatgggaacattgtccgtgaaacaatgaaggacaatgacgtccttgtgcaatacaag
atcatgagggaaactctgatctacttgtcacatcttgaccatgacgatactgaaaagcag
atgctgaagaaacttagtaaccaactcaatggtgaggattggtcatggaacaatctaaat
acattatgttgggcaattggttctatatccgggtcgatggtggaggagcaggagaacaga
tttcttgtcatggtgatacgcgatttgctgaacctatgtgaaatcacgaaaggaaaagac
aacaaggctgtaattgctagcaatataatgtatgttgttgggcaatatcctagatttttg
agagcccattggaagttcttgaagactgttgtgaacaaattgttcgagttcatgcatgaa
acacatcctggagtgcaggatatggcctgtgatacgtttttgaaaattgttcaaaaatgc
aagcgcaagttcgttgtagtccaggttggagaaaacgagccatttgtttctgaactttta
accactcttcccacaactattgcagatttagaacctcatcagattcataccttctacgaa
tctgttggtcaaatgattcaagcagaacctgatccccaaaaaagagacgagtatctgcag
aggttgatggagcttccaaatcagagatggaatgaaattattggacaagcacgacaaagt
gtggactacctgaaagatcaagacgttattcgtgctgttctaaatatattgcagacaaat
actagtgctgctagctcacttggaacttatttcttacctcaaatttctctgatcttcttg
gacatgctcaatgtctatagaatgtacagtgagcttatatctacaagcatcgcacaaggc
ggcccctatgcctcaaggacatccattgtgaaactcttgcgctcggtaaaaagggaaaca
cttaagcttattgaaacatttttggacaaggctgaagatcaatcacacattgggaaacaa
tttgtgccgccaatgatggacccagttttaggtgactatgcaaggaatgtgcctgatgct
agggaatctgaagttctctccctttttgctacaattataaacaagtacaagggggcaatg
attgaggatgtccctcgaatatttgaagctgctttccagtgtactctggagatgatcaca
aaaaactttgaagattatccggagcatcgactcaagttcttttcattacttcgtgcaatt
gctacacattgttttgctgctttgataaggctgtcgagtgagcaattgaaacttgtcatg
gattctataatatgggcttttcggcacactgagaggaacattgctgaaaccgggcttaat
cttttgttggcaatgctgaaaaattttcagaattctgagtttgctaaccagttttatagg
acttactatttgacgatcgagcaagaaatttttgctgttctgacagatacttttcataag
cctgggtttaaattgcatgtattggtgctacagcacttattttgcatggtagttatgttg
tctgagcctctatgggatgcttctactgtgccttgttcatatccaaataatgttgagttt
gttcgcgaatacaccattaagcttcttagtacatccttccccaacatgaccgctgctgaa
gtgactcaatttgtcagtgggctatttgattcaacaaatgaccttccaacattcaagaat
cacataagggacttccttgtgcaatcaaaagagttctctgctcaggacaataaggacctt
tatgccgaggaagcagctgctcagagagagagggaacgtcagcggatgcgttctattcct
ggtctaattgcacccaatgagatccaagatgaaatggtggattcatga

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