Solanum lycopersicum (tomato): 100313952
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Entry
100313952 CDS
T02665
Symbol
Xpo1
Name
(RefSeq) exportin 1
KO
K14290
exportin-1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03008
Ribosome biogenesis in eukaryotes
sly03013
Nucleocytoplasmic transport
sly03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100313952 (Xpo1)
03008 Ribosome biogenesis in eukaryotes
100313952 (Xpo1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100313952 (Xpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
100313952 (Xpo1)
03009 Ribosome biogenesis [BR:
sly03009
]
100313952 (Xpo1)
03016 Transfer RNA biogenesis [BR:
sly03016
]
100313952 (Xpo1)
03036 Chromosome and associated proteins [BR:
sly03036
]
100313952 (Xpo1)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100313952 (Xpo1)
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100313952 (Xpo1)
Pre-60S particles
100313952 (Xpo1)
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100313952 (Xpo1)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100313952 (Xpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
100313952
NCBI-ProteinID:
NP_001234182
UniProt:
D1MAF2
LinkDB
All DBs
Position
3:complement(56083446..56098480)
Genome browser
AA seq
1075 aa
AA seq
DB search
MAAEKLRDLSQPIDVSLLDATVAAFYGTGSKEERAAADHILRDLQNNPDMWLQVVHILSS
TQSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEASLRRERLYISK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSVSHRTELIRATLATLHAFLSWIPLGYIFESTLLEI
LLKFFPLPSYRNLTLQCLTEVAALNFGDFYNEQYIKMYTIFMGQLQSVLPPNTSIPEAYA
NGSNEEQAFIQNLALFFTSFFKSHIRVLESSQENIGALLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFEAAHHNLDNPAMTTNMMGLQMPLLSGMNDGLGAQLMQRRQLYSGPMSK
LRLLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHDDTEKQ
MLKKLSNQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKC
KRKFVVVQVGENEPFVSELLTTLPTTIADLEPHQIHTFYESVGQMIQAEPDPQKRDEYLQ
RLMELPNQRWNEIIGQARQSVDYLKDQDVIRAVLNILQTNTSAASSLGTYFLPQISLIFL
DMLNVYRMYSELISTSIAQGGPYASRTSIVKLLRSVKRETLKLIETFLDKAEDQSHIGKQ
FVPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEAAFQCTLEMIT
KNFEDYPEHRLKFFSLLRAIATHCFAALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLN
LLLAMLKNFQNSEFANQFYRTYYLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCMVVML
SEPLWDASTVPCSYPNNVEFVREYTIKLLSTSFPNMTAAEVTQFVSGLFDSTNDLPTFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMRSIPGLIAPNEIQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagctgagagatttgagtcagcccattgatgtttcgttgcttgacgct
actgttgctgctttctatggaaccggatctaaggaagagagagctgcagcggaccatatt
ttgcgtgatttgcaaaataacccagatatgtggcttcaagtggttcacattctatcgagc
acacaaagcctgaatactaagttttttgctttgcaggttcttgagggtgttattaagtat
agatggaatgcattgcctgtcgagcaacgagatggaatgaaaaactatatttctgaagtt
attgtcaagctttccagtgatgaagcatctctccggcgggaaaggctgtatattagcaag
ctaaacataattttggttcagattttgaagcacgagtggcctgcaagatggcgaagcttc
attcccgacttagttgcggctgcaaagacaagcgaaacaatatgtgaaaactgcatggca
atattgaagcttctcagcgaggaggttttcgatttctcaaggggtgaaatgactcaacaa
aagatcaaggagctcaaacaatctttaaacagcgagtttcaactcatccatgagctatgc
ttgtatgtgctatcagtatcccacagaactgagctcatcagggcgacgcttgctacactg
catgctttcctttcatggattccgcttggctatatttttgaatcaacactgttggaaata
ctgcttaaatttttcccattgccatcttatcgcaatctcacacttcagtgtctaacagag
gttgctgcccttaattttggggatttttataatgaacagtatatcaagatgtacaccata
ttcatggggcagttgcagagtgttcttccacctaatacaagcattccagaggcctatgca
aatggaagtaacgaagaacaggccttcattcagaatctggctctgttttttacatcattt
tttaagtctcatatacgtgtgctagaatcatcacaagagaatataggtgccctcttggtg
ggacttgagtatcttattaatatctcttatgtggatgatacagaagtttttaaggtttgc
ttggactactggaattccttagttcttgagctgtttgaagcagcacatcataatcttgat
aatcctgcaatgactacaaacatgatgggccttcagatgccactgctttctggcatgaat
gatggtcttggagcacaacttatgcagaggagacagctttattctggtccaatgtccaag
ttgaggttacttatgatatcacgcatggcaaaacctgaagaagttctcattgtcgaagat
gaaaatgggaacattgtccgtgaaacaatgaaggacaatgacgtccttgtgcaatacaag
atcatgagggaaactctgatctacttgtcacatcttgaccatgacgatactgaaaagcag
atgctgaagaaacttagtaaccaactcaatggtgaggattggtcatggaacaatctaaat
acattatgttgggcaattggttctatatccgggtcgatggtggaggagcaggagaacaga
tttcttgtcatggtgatacgcgatttgctgaacctatgtgaaatcacgaaaggaaaagac
aacaaggctgtaattgctagcaatataatgtatgttgttgggcaatatcctagatttttg
agagcccattggaagttcttgaagactgttgtgaacaaattgttcgagttcatgcatgaa
acacatcctggagtgcaggatatggcctgtgatacgtttttgaaaattgttcaaaaatgc
aagcgcaagttcgttgtagtccaggttggagaaaacgagccatttgtttctgaactttta
accactcttcccacaactattgcagatttagaacctcatcagattcataccttctacgaa
tctgttggtcaaatgattcaagcagaacctgatccccaaaaaagagacgagtatctgcag
aggttgatggagcttccaaatcagagatggaatgaaattattggacaagcacgacaaagt
gtggactacctgaaagatcaagacgttattcgtgctgttctaaatatattgcagacaaat
actagtgctgctagctcacttggaacttatttcttacctcaaatttctctgatcttcttg
gacatgctcaatgtctatagaatgtacagtgagcttatatctacaagcatcgcacaaggc
ggcccctatgcctcaaggacatccattgtgaaactcttgcgctcggtaaaaagggaaaca
cttaagcttattgaaacatttttggacaaggctgaagatcaatcacacattgggaaacaa
tttgtgccgccaatgatggacccagttttaggtgactatgcaaggaatgtgcctgatgct
agggaatctgaagttctctccctttttgctacaattataaacaagtacaagggggcaatg
attgaggatgtccctcgaatatttgaagctgctttccagtgtactctggagatgatcaca
aaaaactttgaagattatccggagcatcgactcaagttcttttcattacttcgtgcaatt
gctacacattgttttgctgctttgataaggctgtcgagtgagcaattgaaacttgtcatg
gattctataatatgggcttttcggcacactgagaggaacattgctgaaaccgggcttaat
cttttgttggcaatgctgaaaaattttcagaattctgagtttgctaaccagttttatagg
acttactatttgacgatcgagcaagaaatttttgctgttctgacagatacttttcataag
cctgggtttaaattgcatgtattggtgctacagcacttattttgcatggtagttatgttg
tctgagcctctatgggatgcttctactgtgccttgttcatatccaaataatgttgagttt
gttcgcgaatacaccattaagcttcttagtacatccttccccaacatgaccgctgctgaa
gtgactcaatttgtcagtgggctatttgattcaacaaatgaccttccaacattcaagaat
cacataagggacttccttgtgcaatcaaaagagttctctgctcaggacaataaggacctt
tatgccgaggaagcagctgctcagagagagagggaacgtcagcggatgcgttctattcct
ggtctaattgcacccaatgagatccaagatgaaatggtggattcatga
DBGET
integrated database retrieval system