Solanum lycopersicum (tomato): 100316890
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Entry
100316890 CDS
T02665
Symbol
ARF6a
Name
(RefSeq) auxin response factor 6a
KO
K14486
auxin response factor
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100316890 (ARF6a)
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
100316890
NCBI-ProteinID:
NP_001234663
UniProt:
C7FFK5
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Position
12:1263011..1270962
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AA seq
881 aa
AA seq
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MRLSSAGFNPQPEMAAGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTN
KEINGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELG
TLSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEW
KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPS
SVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMR
FQMLFETEESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIE
PLTTFPMYPSPFSLRLKRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSLNFQG
FGVTPFMQPRFDASMLGLQPDILQAMAALDSSKLANQPLMQFQHIPSTSASSIQSQLLHP
SNLQHTFLQGLPENQLISQAQMLQQQLQCHQSYNTQQQQLQRQRLYHDQQLQEPHQVQRQ
DQQQTKAQLCSATQSQLSHLQVLGSTGSQQTFSDLVGNHINTSNNSSTMQSLLSSFSRNG
ASTSLNMPETNSLVSPSSSSKRIALESQIPSQAPYMVTQAEVLTVPNTKVSDFSTLFSPN
PGRQVLDYQAVAVSQNNALFGVNGMSNLKGNSPENGSLPVPYATSTFTSTVGGEYPVNSD
MTTSSCVDESGVLQSSENVDQANSLTETFVKVYKSESFGRSLDISKFSSYNELRSELARM
FGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHEFVNSVWYIKILSPLEVQQMGKQGL
DLPSAGKTQRITSNGNGCDDSMNRNHSCNIMNGIPLGSLEY
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagattatcttcagctgggttcaatcctcagccagagatggcagcaggggagaagaaa
agcctgaattcagagctgtggcatgcttgtgcagggccactggtctctcttccacatgta
ggaaccagagttgtgtattttcctcaagggcatagtgagcaggttgcggcatccacaaac
aaggaaataaatggtcatatccctagctatcctggattaccaccccaacttatttgtcag
ctacacaatgtgaccatggatgcagatgttgagactgatgaagtatatgctcaaatgact
ctgcagccactaactccacaagagcaaaaagatgtgtgccttctaccagctgaacttggg
accctaagtaaacaaccaagtaattatttctgcaaaacattgactgcaagcgataccagt
acccatggtggattctctgtccctcgacgtgctgcagaaaaagttttccctcctcttgat
tactcgcaacagcctcctgtgcaagagttgattggtaaagatcttcatggaaatgaatgg
aagttccggcatatatttcgcggccaaccaaagaggcatctcctgacgacaggatggagt
gtgtttgtaagtgcgaagagacttgttgcaggcgactcagttatctttatctggaatgaa
aataatcaattacttttggggatacgacgtgccaatcgtccgcaaactgttttaccttcc
tcggtattgtcaagtgatagcatgcacattggtcttctagctgctgcagctcatgcagct
gcaacaaatagccggtttacaatatttttcaatccaagggcttgtccatcagaatttgtc
atacctctcgccaagtatgctaaagcagtgtatcatacgcgagtttctgttggcatgagg
ttccaaatgctatttgaaacagaagaatcaagcatccgtaggtatatgggcacaattact
ggcatcggtgatctagatcctgttcgttggccaaattctcattggcagtctgtaaaggtt
ggatgggatgaatcaactgcaggggagaggcagcctagagtttcactgtgggaaattgaa
cctctgacaacatttccaatgtatccatctcctttctcccttaggttgaagcggccatgg
ccacctggactgccttcatttcctggtctatcaaatggtgatatgactatgaattctcag
cttccatggctgcatggtggcatgggtgatcaggggatacaatcacttaatttccaggga
tttggtgttactccattcatgcagccaaggttcgatgcttctatgctaggtttgcagcct
gacattttgcaagcaatggcagcattagattcttctaagcttgcaaatcagccacttatg
cagttccaacatatccctagtacttcagcatcttcgattcagagccagcttttgcatcca
tccaatttgcaacatactttcctccaaggcctcccggagaaccaactaatatctcaggca
cagatgctgcagcagcaattgcagtgccaccaatcttataatactcagcagcaacagttg
cagcgccagcgattgtatcatgatcaacaactacaggaaccccatcaagtacagcgtcaa
gatcagcagcaaaccaaggctcaattgtgttcagctactcagtcacagctttctcattta
caggtcctaggttcaacgggttctcaacaaacattttctgatttagttggtaatcatatt
aatacatctaacaacagttccaccatgcaaagtctcctgagctcattttcccgtaatgga
gcatccacttccctgaacatgcctgagaccaactctctagtgtctccttcctcatcatca
aagcgaattgctctagaatctcagatcccttcacaagctccatacatggtgacacaggct
gaagttttgacggtgcctaatactaaggtctcagatttttccactttgttttcaccaaat
cctggcagacaagttttggattatcaagctgtagcagttagccaaaacaatgcgctattt
ggagttaatggtatgtcaaacctgaagggtaacagtccggagaacggatctttacctgtg
ccttatgctacctctaccttcacaagtacagtgggtggcgagtatcccgttaattcagac
atgacgacatcaagttgtgtagatgaatcaggtgtcttgcagtcctcagaaaatgtggat
caagcaaactcacttacagaaacctttgttaaggtttacaaatcagagtcctttggacga
tcactggatatctccaaatttagcagctataatgagctgcgaagtgagcttgctcgcatg
tttggccttgaaggcctgttggaggatcctgagagatcaggctggcagcttgtattcgtt
gaccgtgagaatgatgttctcctccttggtgatgacccctggcatgagtttgtgaacagt
gtttggtacatcaagatactctctccacttgaagtgcagcagatgggcaaacagggcctc
gacctaccaagtgctggcaaaacgcagaggatcactagcaatggcaatggctgcgatgat
tccatgaaccggaaccattcgtgtaatattatgaatgggatccccctggggtcacttgag
tactaa
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