Solanum lycopersicum (tomato): 100316892
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Entry
100316892 CDS
T02665
Name
(RefSeq) TIR1-like protein
KO
K14485
transport inhibitor response 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100316892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
100316892
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100316892
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
100316892
NCBI-ProteinID:
NP_001234673
UniProt:
C8C507
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All DBs
Position
9:63655530..63659530
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLTTDKDRNAVSVVCKSWYEIERWCRRRIFVGNCYAVSPRIMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVYPWILAMSRSYPWLEEIKLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLAAIAANCRNLRKLDLGESEVEDLSGHWLSHFPDNCT
SLVSLNIACLASEVSLLALERLVTRSPNLTTLKINRAVPLERLPNLLRRTSQLVKFGTGV
FSADVRSDFFSNLTEAFSSCKQLKCLSGFWDVVPAYLPALYPVCSRLTSLNLSYATCQNP
DLGKLISQCHNLRRLWVLDYIEDTGLEELAANCKDLQELRVFPSDPFAAEPNTTLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRTPDYLTLGSFDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGAHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFEACKMLAQKMPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGRRFDTPGYVWTMDEDAAVSLT
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaggaagtactagaacacgtcttctccttcctcaccaccgac
aaagaccgtaacgcggtatctgtagtctgcaaatcgtggtacgagatcgaacggtggtgt
aggaggagaatattcgtcggaaattgctatgctgttagccctaggatcatgatccgacgg
tttccagaagtcagatctgttgagcttaaagggaagcctcattttgctgatttcaatctt
gtaccggaaggttggggagcttatgtgtatccttggattttggctatgtctaggtcttat
ccatggcttgaagaaattaagcttaaaaggatggtaattactgatgagtcgttggagttg
atttctaagtcgtttaagaactttaaagttttggttttgtcttcatgtgatgggtttact
actgatggacttgctgctattgctgctaactgcaggaatctgagaaaactagacttgggg
gagagtgaagtggaggaccttagtgggcattggctaagccatttccctgataactgcacg
tcacttgtttcacttaacatagcttgtttggcctctgaggtcagtctgttagcgttggag
cgcctggttactcgctctcctaatttgacaactctaaagataaatcgtgctgtgcccctt
gagaggcttccaaacctgctccgccgcacttcccagttggtcaaatttggtacaggtgtt
ttctctgccgatgtgcgatctgattttttctcaaacctgacagaagctttttcaagctgc
aagcaacttaaatgcctgtctggattttgggacgttgtaccagcttaccttccagcttta
tatccagtgtgctcaagactcacctccttgaatttgagctatgctacctgtcagaaccct
gaccttggcaagctcataagtcaatgtcacaatttgcggcgtttgtgggtgctagactac
attgaagatactggtcttgaggaacttgctgccaattgtaaggacctccaagagctgagg
gtgtttccttctgacccatttgctgcagaacctaatacaaccttgacagagcaaggcctt
gtagctgtctcagatggctgtccaaagctccagtctgttttatacttctgccgccaaatg
actaatgcagctttagttactattgctaggaatcgacctaacatgattcgttttcgcttg
tgtatcattgagcctcgaactcctgattatttaacccttggttcatttgatgctggtttt
ggggccatagtagagaactgtaaggaattgcggcgactttcactttctggcctccttacc
gatcgtgtcttcgaatacattggtgctcatgctaaaaagttagagatgctttccatagct
tttgctggtgatagcgatctgggactccaccatgtgctctctggttgtgatagccttcgg
aagttggagatcagagattgtccgtttggagacaaggctctcttggctaatgctgcaaag
ctcgagacaatgcgatccctttggatgtcttcttgttcagtaagttttgaagcatgtaag
atgctagctcagaagatgcctaggcttaatgtggaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtggagaaactttacatatatcgaacagtagctgga
cgaagatttgatacacctggttatgtttggacaatggatgaagatgcagctgtaagcttg
acctga
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