Solanum lycopersicum (tomato): 100316899
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Entry
100316899 CDS
T02665
Symbol
SQS1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00100
Steroid biosynthesis
sly00909
Sesquiterpenoid and triterpenoid biosynthesis
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100316899 (SQS1)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
100316899 (SQS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sly01006
]
100316899 (SQS1)
Enzymes [BR:
sly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100316899 (SQS1)
Prenyltransferases [BR:
sly01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100316899 (SQS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
100316899
NCBI-ProteinID:
NP_001234716
UniProt:
A0A3Q7ETS2
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Position
1:93106243..93113856
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AA seq
411 aa
AA seq
DB search
MGTLRAILKNPDDLYPLIKLKLAARHAEKQIPPEPHWGFCYLMLQKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFACGTKEYKVLMD
QFHHVSTAFLELGKLYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNALSHVEDCLTYMFNLHDPAIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
DAILKTCRDSGTLNKRKSYIIRNEPNYSPVLIVVIFIILAIILAQLSGSRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggaacattgagggcaattctgaagaatccagatgatttgtatccattgataaagctc
aaactagcggctagacatgcggagaagcagatcccgccggagccacattggggcttctgt
tacttaatgcttcaaaaggtctctcgtagttttgctctcgtcattcaacagcttcctgtc
gagcttcgtgatgctgtatgcatattctatttggtccttcgagcacttgacactgttgag
gatgataccagcatacccaccgatgttaaagtaccaattttgatctcttttcatcagcat
gtttatgatcgcgaatggcactttgcatgtggtacgaaggagtacaaggttctcatggac
cagttccatcatgtttcgactgcttttctggaacttggaaaactttatcagcaggcaatt
gaggacattaccatgaggatgggtgcaggaatggcaaaatttatatgcaaggaggtggaa
acaactgatgattatgacgaatactgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccacgcctctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacattatcagagattatttggaagatataaatgaa
gtacccaagtgccgtatgttctggccccgtgagatttggagtaaatatgttaacaaactt
gaggacttgaagtacgaggagaactcggttaaggcagtgcaatgtctcaatgacatggtc
accaatgcattgtcacatgtagaagattgtttgacttacatgttcaatttgcatgatcct
gccatctttcgattctgtgccattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgaggcgtggtcttactgctaag
gtcattgaccggaccaagactatggcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataataacgatccaaatgcaacaaaaactttgaagaggctt
gatgccatcctgaaaacttgcagagactcgggaaccttgaacaaaagaaaatcttacata
atcaggaacgagcctaattacagtccagttctgattgttgtcatcttcatcatactggct
attattcttgcacaactttctggcagccggtcttag
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