KEGG   Solanum lycopersicum (tomato): 100736468
Entry
100736468         CDS       T02665                                 
Symbol
ATG8a
Name
(RefSeq) autophagy-related protein 8a
  KO
K08341  GABA(A) receptor-associated protein
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    100736468 (ATG8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    100736468 (ATG8a)
   04121 Ubiquitin system [BR:sly04121]
    100736468 (ATG8a)
   03029 Mitochondrial biogenesis [BR:sly03029]
    100736468 (ATG8a)
Membrane trafficking [BR:sly04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    100736468 (ATG8a)
Ubiquitin system [BR:sly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   100736468 (ATG8a)
Mitochondrial biogenesis [BR:sly03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100736468 (ATG8a)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 100736468
NCBI-ProteinID: NP_001234630
UniProt: F1JYZ5
LinkDB
Position
7:69166715..69177199
AA seq 119 aa
MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF
NT seq 360 nt   +upstreamnt  +downstreamnt
atggccaaaagctccttcaaattggaacaccctcttgagaggcgacaggctgaagctgct
cgtatcagggagaagtaccctgatagaataccggtgattgttgagaaggctgaaagaagt
gacatccctgacattgacaagaaaaagtatttggttcccgcggatctgactgttggacaa
tttgtgtatgttgttcgcaagaggattaagctcagcgctgagaaggccatttttatcttt
gtgaagaatatcctcccccctacagctgccatgatgtctgccatttatgaggaacacaag
gatgaggacggcttcctgtacatgacctacagtggcgagaataccttcggatccttctga

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