Solanum lycopersicum (tomato): 100736468
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Entry
100736468 CDS
T02665
Symbol
ATG8a
Name
(RefSeq) autophagy-related protein 8a
KO
K08341
GABA(A) receptor-associated protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
sly04145
Phagocytosis
sly04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
100736468 (ATG8a)
04136 Autophagy - other
100736468 (ATG8a)
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
100736468 (ATG8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
100736468 (ATG8a)
04121 Ubiquitin system [BR:
sly04121
]
100736468 (ATG8a)
03029 Mitochondrial biogenesis [BR:
sly03029
]
100736468 (ATG8a)
Membrane trafficking [BR:
sly04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100736468 (ATG8a)
Ubiquitin system [BR:
sly04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
100736468 (ATG8a)
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100736468 (ATG8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
100736468
NCBI-ProteinID:
NP_001234630
UniProt:
F1JYZ5
A0A3Q7IC58
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All DBs
Position
7:69166715..69177199
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AA seq
119 aa
AA seq
DB search
MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagctccttcaaattggaacaccctcttgagaggcgacaggctgaagctgct
cgtatcagggagaagtaccctgatagaataccggtgattgttgagaaggctgaaagaagt
gacatccctgacattgacaagaaaaagtatttggttcccgcggatctgactgttggacaa
tttgtgtatgttgttcgcaagaggattaagctcagcgctgagaaggccatttttatcttt
gtgaagaatatcctcccccctacagctgccatgatgtctgccatttatgaggaacacaag
gatgaggacggcttcctgtacatgacctacagtggcgagaataccttcggatccttctga
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integrated database retrieval system