Solanum lycopersicum (tomato): 100736470
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Entry
100736470 CDS
T02665
Name
(RefSeq) autophagy 8h
KO
K08341
GABA(A) receptor-associated protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100736470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
100736470
04121 Ubiquitin system [BR:
sly04121
]
100736470
03029 Mitochondrial biogenesis [BR:
sly03029
]
100736470
Membrane trafficking [BR:
sly04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100736470
Ubiquitin system [BR:
sly04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
100736470
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100736470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Branch
Motif
Other DBs
NCBI-GeneID:
100736470
NCBI-ProteinID:
NP_001234639
UniProt:
F2YHL2
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All DBs
Position
1:complement(73355868..73361616)
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AA seq
119 aa
AA seq
DB search
MGKTFKDEYSYDERLTESQDIIAKYPDRVPVVAERYSKTDLPEMEKKKYLVPRDMSVGQF
IHILSGRLHLAPGKALFVFVNNTLPQTTSLIETVYESSKDKDGFLYMCYSSEKTFGGHS
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaccttcaaagatgaatattcatatgatgaaagactcacggaatcacaggat
ataattgccaaatatcctgatcgtgtgccggtggtggctgaaagatattcaaaaacagac
ctccctgagatggaaaagaagaaatacctggtacctcgtgatatgtctgttggacaattt
atccacattctgagtggcaggctgcatctggctcctggaaaagctctcttcgtgtttgtg
aataacaccttgcctcaaacaacaagcttgattgagaccgtgtatgaatcttccaaagat
aaagatgggttcctctacatgtgctacagcagtgagaaaacctttggtggtcactcttag
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