Solanum lycopersicum (tomato): 101243662
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Entry
101243662 CDS
T02665
Name
(RefSeq) protein transport protein SEC24 A
KO
K14007
protein transport protein SEC24
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101243662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101243662
Membrane trafficking [BR:
sly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101243662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
101243662
NCBI-ProteinID:
XP_004232597
LinkDB
All DBs
Position
2:62113244..62125639
Genome browser
AA seq
1051 aa
AA seq
DB search
MGTEYPNRPTFPSRPAATPFGVPQSTTPFQSSRPVVGSDASAFRPAPPTSSPAMPPPSSS
GPMVGPGISSFRPMPPGMPNDAGRPPPTSTPPYGPTVSGPFPRFPSPQFPSTAQVPPPRT
SMPGQPVVAAPVRPVSGPFSTPPGAHHPQIQPPTVPMGSPPQGASTVQPSPNVYQGPMQS
QFSAARATSQPSSPLAGSAYPAARPGFQSGFPGYISQQPSGFAQAPPRQSVPFPSQPGGY
VPPVPAASSPYLSQQGGFAPPPPPLTSQRPGSMPPTSAMQGLVEDFSSFSIGSVPGSFDS
GLDSKVLPRPIDVDVERNVLSEMYPMNCSSRFLRLTTSGIPNSQSLASRWHLSLGAVVCP
LAEASDGEEVPVVNFAPTGIIRCRRCRTYVNPYVTFTDSGRKWRCNICALLNEVPGEYFA
HLDASGRRVDLDQRPELTKGSVEFIAPAEYMVRPPMPPLYFFLIDVSLTAVRSGMLEVLA
QTIKNSLDSLPGFPRTQIGFITYDSTVHFYNMKSSLTQPQMMVMSDLEDVFVPLPDDLLV
NLSESRTVVDAFLDSLPSMFQDNANVESAFGPALKTAFMVMNQLGGKLLIFQSSLPSLGV
GRLKLRGDDVRVYGTDKEHTIRVPEDPFYKQMAADFTKYQIAVNVYAFSDKYTDIATIGT
LAKYTGGQVYYYPSFQASVHKDRLRHELTRDLTRETAWESVMRIRCGKGVRFTTYHGNFM
LRSTDLIALPAVDCDKAYAMQLSLEETLLTSQTVFFQIALLYTSSSGERRIRVHTAAAPV
VSDLGEMYRLADTGAIISLFTRLAIEKTLTSKLEEARNSIQLRIVKALREYRNLHAVQHR
VAGRMIYPESLKYLPLYGLALCKTTALRGGYADAQLDERCAAGYTMMALPVKRLLKLLYP
KLIRIDEYLLKKPSSREESKDILKGVPLTTESLDPQGLYLFDDGFRFVIWFGRMLSPNMI
QSLLGENFAADFSKVSLQELDNEMSRELMGLLKRQRESDRSYYQLCHLVRQGEQPREGFF
LLANLIEDPVGGSIGYQDWILQVHRQVQQNA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgaatatcccaatcggccaacctttccctcaaggcctgctgctacacctttt
ggtgttccgcagagtacaactccttttcaatcatctcgtccagtggttggatctgatgct
tctgcttttcggcctgctcctcctacttcttctccggctatgccacctccttcctcatct
ggacccatggttggaccagggatatcttcttttagaccgatgccacccgggatgcctaat
gatgcagggaggccacctccaacatcaacacctccatatgggccgacagtctctggccct
ttcccacgtttcccctcaccgcagtttccttctacagctcaggtaccacctccacgcact
tcgatgccggggcagccggttgtagcagcccctgttagacctgtttcagggcctttctca
acacctcctggtgcccatcatccacaaatccaacctcctactgttccgatgggatcgcct
cctcaaggtgcaagtacagtgcagcctagtccaaatgtttatcagggtcccatgcagtcc
cagttttctgctgccagagcaacctcacagccatcttcccctttagcaggttcagcttat
cctgctgctagacctggctttcaatctggttttccaggatatataagtcagcaaccttca
gggtttgcacaagctccccctagacaatcagtaccatttccttctcagcctggcggctat
gttccaccagtgccagcagcttctagcccctatctttctcaacaaggagggtttgcacca
ccaccaccacctctaacatctcaacgtccaggatctatgcctcctacatctgctatgcaa
ggtttggtggaagacttcagttccttctcaattgggtctgttccaggatcatttgattcc
ggccttgactctaaggttctaccaagaccaattgatgttgatgttgagcggaatgttttg
tctgagatgtatcccatgaactgcagttcaagatttttgaggctcacaactagtggcata
ccaaattctcagtctttggcttcaaggtggcacttatctcttggagcagttgtttgtcct
ctcgccgaggcatcagatggggaagaagttcctgtggttaattttgccccaactggtatc
atccgctgtagaaggtgtcgcacttatgtaaatccttatgtgacattcaccgacagtgga
agaaagtggagatgtaatatatgtgcattgcttaatgaagttcctggtgaatatttcgca
catttggatgccagtggcagaagagttgacttggatcaaaggcctgaacttaccaaaggt
agcgtggagtttattgctccagctgagtacatggtccggcctccgatgcctcccctgtac
ttttttctcattgatgtatctttgactgctgtgagaagtggaatgcttgaggttttagca
caaaccatcaagaacagtttggacagcttgcctggatttccaagaacacagatcgggttt
ataacatatgacagtacagtacacttttataacatgaagtcatccttgactcaacctcaa
atgatggtcatgtcagatcttgaagatgtatttgtgccattgccagatgatcttcttgtc
aacttgtcagaatcaagaactgtggtagatgcatttctagacagccttccttcaatgttt
caggataatgcgaatgtggaatcagcttttggtccagctcttaaaacagccttcatggtt
atgaaccaacttggcggtaaattgctgatctttcaaagcagtcttccatcacttggtgtt
ggtcgcttaaaattacgaggagatgatgttcgtgtatatggaactgataaagagcataca
ataagagtacctgaagatcctttttataaacaaatggctgctgatttcaccaagtatcag
atagcagtcaatgtatatgctttcagtgacaaatatactgacatagctactataggtacg
ctggcaaagtacacaggtggtcaggtgtactactatccaagttttcaagcgtccgttcac
aaagatagattgcgtcacgagttaacccgagatcttacaagggagactgcttgggagtct
gtcatgcgcataagatgtggaaaaggtgttcgttttacaacatatcatgggaacttcatg
ctgagatccactgatctgatagcacttcctgctgttgactgtgataaagcatatgcaatg
cagttatcccttgaagaaacactactcacttcccagacagtatttttccaaattgctcta
ctatacacatcatcttctggagaaaggcgcattagagtacacacagcagcagcaccggtt
gtttcagatttaggagaaatgtatcgcctagctgatactggtgctatcatttctcttttt
accaggcttgccattgagaaaactctgacctctaaattagaggaggctcgaaattctatt
caactcaggattgtgaaagctcttagagaatatcgaaatctccatgctgttcagcaccgt
gtggctggaaggatgatttatccagaatctttaaagtacttgccattatatggattagct
ttatgcaaaacaactgcccttcgcggtggatatgctgatgctcagcttgacgaacgatgt
gctgctggatataccatgatggctttgcccgttaaaagattgttgaagcttctatatcct
aagttgatccgtatagatgaatatcttctaaaaaaaccatcttcgcgagaggagtctaaa
gacatcttgaaaggggttccacttacaacagagagcttagatccccagggtctctatctc
tttgatgatggtttccggtttgtcatctggttcggtagaatgctttctcctaatatgatc
cagagtttgctcggagaaaactttgctgctgacttctctaaggtttcacttcaagagcta
gataatgaaatgtcaagagaactgatgggtttgcttaaaagacagagggagagtgacaga
tcatattatcagttatgccatcttgtgaggcaaggtgaacagcctagagaaggcttcttc
ttgcttgcaaatctgattgaggatccagttggtggttctattggttaccaggattggatt
ctgcaagtacaccgacaagtccagcaaaatgcataa
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