Solanum lycopersicum (tomato): 101243803
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Entry
101243803 CDS
T02665
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101243803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101243803
Spliceosome [BR:
sly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101243803
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
101243803
NCBI-ProteinID:
XP_025887618
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All DBs
Position
7:68805369..68807572
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AA seq
327 aa
AA seq
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MRIKELLPSAIIMVVSVTASTTSGKPLPEDVLQRTLEACDRTLALDSSKKKVVDFVESRM
STIAPNLCGVVGSAVAAKLMCCAGGLSLLANMPADNVRSLGGKRKNLAGFSTANALRFCY
IEETDVYQSTPPSLRVKVCRILANKAILAARMDLSKAGMFNFKEEICKKMEKLQELPPAR
LPKPLPVPDFRSKKQRGGVRHRKRKDLYQVTEAQKLRNRVKFGLPEESSLGDGLGVGYGM
LGQAGSGKLLVSARQNKKKAKIYKVKSYGGSGAAARSGLMSSSFAFTPAQGIELSNPQAY
TDGTQSAYFSETGTFSKIKRQKSVFGV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataaaggaattgttaccttcagctattatcatggttgtttctgttacggcgtca
actactagtggcaagccgttgccggaggatgttttacagaggacattggaagcatgtgat
agaaccctagctcttgattcatcgaagaagaaggtcgttgattttgttgagagtcgaatg
agtactattgctcctaatctgtgtggtgttgttggtagtgcagttgctgcgaaactaatg
tgttgtgctggtggtttatcgttgttggcgaatatgcctgctgataatgtgaggagtctg
ggtggtaaaaggaagaatttagcagggttttccacagctaatgctttgcgattttgttat
attgaggaaacagatgtatatcagagtacacctccttcgttgagggtgaaagtttgtaga
attttggcgaataaagctattctagcagcacgaatggacttgagcaaagctggaatgttc
aattttaaggaagagatttgtaaaaagatggagaaattgcaagagttacctcctgcaagg
ctgccaaagcctcttccagttcctgattttaggtctaagaagcagagaggtggtgttcgg
catagaaagaggaaagatctatatcaggttacagaggcgcagaagctgaggaatagggtg
aagtttgggttacctgaagaaagctcgttaggggatggattaggggtgggctatggtatg
cttggtcaggctggaagtggcaagttgcttgtatcagctcgtcagaacaagaaaaaagca
aagatttacaaggtgaagagttatggcggcagtggtgcagcagccagatcaggcctgatg
agttcgagttttgccttcacacctgcacaagggattgagctatcgaatcctcaggcatat
acggatggaactcaaagcgcctatttttctgagacaggaacattttcaaagattaagaga
caaaagtccgtttttggtgtttga
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