Solanum lycopersicum (tomato): 101243899
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Entry
101243899 CDS
T02665
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101243899
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101243899
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101243899
03036 Chromosome and associated proteins [BR:
sly03036
]
101243899
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101243899
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101243899
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101243899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
101243899
NCBI-ProteinID:
NP_001296947
UniProt:
A0A3Q7GWU7
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All DBs
Position
6:complement(43568072..43572226)
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AA seq
498 aa
AA seq
DB search
MWKHFLSKLPKKSLKSESVDSGRGNSDSNSPNASSNLGPGRPNSVPRRTSSVVFPASVIA
GIEPLISFKDVPSSEKMNLFISKLSLCCVDFDFRDPTKNVAEKELKRATLFELLDFVSAN
PPKFSEPAILALCKTCAVNLFRVFPPNYRSNNSHASENDDDEPTFDPAWPHLQIVYDLLL
KFVTSSSLEAKVAKKYINHQFILKLLDLFDSEDPRERDCLKAILHRIYGKFMVHRPYIRK
SISNVFYRVVFESEKHNGIAELLEIFGSVVTGFALPLKEEHKIFLSRTLIPLHKPKSLGI
YFQQLSYCINQFIEKDPKLASTVIRGLLKYWPITSTQKEVMFLSELEEILEVINMAEFQK
VMVPLFWRIGCCINSYHFQVAERALFLWNNDQIVNLIAHNRHVILPIIFPAVESNTQNHW
NHAVQNLSLNVRRMFSEMDDVLFLACHSHYKEEQEKIDLESEKRKEAWEQLETAASLRPP
VAGNIAVLVTPLATSITC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcattttctgagtaagcttccgaagaaatcactgaaatctgagtcagtagac
tcaggaagaggcaattcagactcaaacagtccgaatgcaagctcaaatttaggccctgga
aggcctaatagtgttccaaggaggacttcctcagttgtgttcccagcaagtgtgattgca
gggatcgagcctttgatttccttcaaagatgttcccagctctgaaaagatgaatcttttt
atcagtaagttaagtctctgctgtgtagactttgatttcagggacccaactaagaatgta
gcagaaaaggaactaaaaagggctacattatttgagcttttggattttgtatctgctaat
ccacccaaattttcagaacctgcaattcttgcattgtgtaaaacatgtgctgttaatttg
tttcgggttttccctcctaattatcggtctaataatagccacgccagcgaaaatgatgat
gatgagcctacttttgaccctgcctggcctcacttgcaaattgtgtatgatctgttgctt
aagtttgtaacatcctcttctcttgaagctaaggttgcaaagaagtatataaaccatcag
ttcatcttgaaattacttgacttgtttgattctgaagatccaagggaaagagattgtttg
aaagctattttgcataggatttatggcaagttcatggttcacaggccttatataaggaag
agtataagcaatgtgttttaccgtgttgtgttcgaatcggagaaacataatgggattgct
gaacttttggagatatttggaagtgtggttacagggttcgctctgccattgaaagaggag
cataagatctttttgtcaaggaccttgattcctttgcacaagccaaaatccttggggatt
tactttcaacagttatcatattgtattaaccagttcatagagaaagatcccaaattggct
agcactgtgattaggggtttgttgaagtactggcctatcacaagcacccaaaaggaggtg
atgtttttgagtgagctggaagaaattttggaagttattaacatggctgagttccaaaaa
gtgatggttcccttgttctggcggatcggttgctgcatcaatagttaccattttcaggtt
gctgaaagggctctcttcctttggaataatgaccaaattgtcaatttgattgcacataac
cggcacgtgattctcccgattatattcccagctgtggaaagcaatactcagaaccactgg
aatcatgctgtgcagaacttgagtctaaatgtaagaaggatgttctccgaaatggatgat
gtacttttccttgcttgtcattctcattacaaggaagaacaggagaaaatagacttggaa
tctgaaaaacggaaggaagcatgggaacagctggagactgcagctagtctacgtccacct
gtagctggaaacattgctgtcctggtaacgcctttagcaacttcaatcacttgctaa
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