Solanum lycopersicum (tomato): 101243938
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Entry
101243938 CDS
T02665
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101243938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101243938
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
101243938
Ubiquitin system [BR:
sly04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
101243938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
101243938
NCBI-ProteinID:
XP_010315382
LinkDB
All DBs
Position
1:complement(93972184..93981426)
Genome browser
AA seq
1160 aa
AA seq
DB search
MEAGQHHDASCNAKPTANANDNSNSIEGNSFANGASLDPKVRSECKPGEILRNLENVSYI
YRQDVVKCKTDGKIGLVTEVAGDSDSDSSLTDDEDEDEDDGEEDDDDDDDGGGGPDDDDG
GDDSNTEDDRDNNEKAEEADDGNKDRSNCKSDPLIADHVRVLWMDESESTESINNVIVVD
RGFLHGDYVAAASDPTGQVGLVVDINISVDLLAHDGSIFKDVSSRELKRVRGFTVGDYVV
LGPWLGRIDDVFDNVTVMFDDGSVCKVMKADPLRLKPVGRDGLEDGHFPFYPGQRVKASS
SSVFKNSRWLSGSWKANRLEGTVTKVTVGSVFIYWIASAGYGPDSSTAPAEEQNPKNLKL
MSCFSHAIWQLGDWCLLPSSFALDKQLSKLQLSDSTKTVSESSQPLTDGDSEVVHLEEST
GNSDCMEIDVESSVDGNCETLEHDYLAESSTCANSLSLSKESGQESWPLHRKKIRKVVVR
RDKKARKKEENFERALLIVNTRTSVDVAWQDGKIEGGLESTSLIPIESPGDHEFVAEQYV
VEKAADDADDSNDVRRVGVVKSVNAKERTASVRWLKLVTRAEDPKEFDKEEVVSVYELEG
HPDYDYCYGDVVVRLLPVSLPAKVGSVLTSTEESEHLLVPVEAKEDEQKHSKCNEAEAAP
SDDTCSQFSDLSWVGNITGLRNGDIEVTWADGMISLFWFLQVGPQAIYVVDRDDDESIVA
GSDVGDDVASWETVEDHERETLGNVEEELGTTNATDISIEDEDGAMATEDSGRNGALSIP
LAALGFVTRLASGIFSRGRKQTDSSSLDSRSEDEEREGTFAKIFTGDDSWSQRSGDLDNS
PRLPAAGNAEDHDTMEVTDVIEANLTSEMGNSSDQHDDQTYSFKRFDITTDPYDHHFLGT
SGQNNAGRKWLKKVQQDWNILQNNLPDGIYVRVYEDHMDLLRAVIVGAYGTPYQDGLFFF
DFHLPPEYPDVPPLAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDSSSSSILQV
LVSLQGLVLNSRPYFNEAGYDKQVGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFE
ELIREHFRMRGYYILKACDAYMKGFLIGSLIKDASVSNNSSANSNSVGFKLMLAKIVPKL
FLALKEIGVECEEYQHLHQL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggaagctggccaacatcatgatgcttcctgtaatgctaaacccactgcaaacgcaaac
gataatagcaattcgatagaaggcaattcttttgcaaatggggctagcttggatccaaaa
gttagatcagaatgcaagccgggagagattctccggaacttagagaatgtatcctatata
tatagacaagatgttgtgaaatgcaaaactgatggtaagattggtcttgtgactgaggtt
gctggtgactcagattcagatagcagcttaactgatgatgaagatgaagatgaggatgat
ggagaagaagacgatgatgatgatgacgacggtggtggtggtcctgatgatgatgatggt
ggtgatgattccaacacggaagacgatagggataacaatgaaaaggctgaggaagctgat
gatgggaacaaagaccgtagtaattgtaagagtgatccgcttatcgcagaccatgttaga
gtcctctggatggatgagtctgagtctacagagagtattaataatgtcatagttgtcgat
agaggatttctgcatggtgattatgtcgctgcagcttctgatccaacaggtcaagtagga
ctcgtggttgatatcaatatatctgtagatttattagcgcacgatggctctatttttaaa
gatgtctcatctagagagttgaaacgtgttcggggttttacagttggtgattatgttgtc
cttggcccttggttgggtagaattgatgatgtttttgataatgtcacagtgatgtttgat
gatggttctgtatgtaaagttatgaaggctgaccctttacgtcttaaaccagttggtagg
gatggccttgaagatggacattttcctttctatcctggtcagcgtgtaaaagctagctca
tcatcagttttcaagaattccagatggttatctggctcatggaaagcaaataggttagaa
ggtacagtaactaaagttactgttggttctgtcttcatctactggattgcatctgctgga
tatgggcccgattcatccactgctccagctgaagaacaaaacccaaagaatttgaaactg
atgtcttgtttttctcatgcaatctggcaactaggtgactggtgtcttcttccttcatct
tttgccttagacaagcaattgtcaaaattacaactaagtgactccaccaaaactgtatca
gaatcttctcaacctttaacagatggtgattcagaagttgtccatttggaggaatcaaca
ggaaatagtgactgtatggaaattgatgtggaatcttctgtggatggaaattgtgaaact
ttagagcatgattaccttgcagagtccagtacatgtgctaattcattgtcactttctaag
gaatcaggccaagagtcatggccccttcatcgtaaaaagatccgcaaagttgtggttagg
agagataaaaaggcacgtaagaaagaggaaaattttgaaagagctcttctaattgtgaat
actaggacatctgttgatgttgcttggcaggatggaaaaatagaaggaggcttggaatcc
acatccttgatccctattgaaagccccggggatcatgaatttgttgctgaacaatatgtt
gtcgagaaagctgctgatgatgctgacgattctaatgatgttaggcgtgttggagttgtg
aaaagtgttaatgcaaaggagcgtacagcttctgtgaggtggttaaagctagttaccagg
gcagaggaccccaaggagtttgacaaagaggaagtggtcagcgtatatgagctggagggg
catcctgactatgactattgttacggtgacgttgttgttcgtttgttacctgtttctcta
ccagcaaaagtgggctctgttttgacatctacagaagaatcagaacatctgttggttcca
gttgaagccaaagaagacgagcaaaagcattcaaaatgcaatgaagcagaagccgctcca
agtgacgatacttgttcccaattttcagatctctcctgggttgggaatattactggacta
agaaatggagacatcgaagtcacgtgggctgatgggatgatatccctgttctggtttctt
caggttgggcctcaagcaatttatgttgttgatcgtgatgatgatgagtctattgtggct
ggaagtgatgttggtgatgatgtagctagctgggaaacagttgaagatcatgaaagggag
actcttgggaacgtagaagaggaacttggaacaacaaatgctactgacatcagtattgaa
gatgaagatggtgccatggccactgaagattcaggaaggaacggggctctgtctattccc
ctggctgcactaggatttgtgaccaggctggcctctggaattttttctaggggccgcaaa
cagactgattcttcgagtttagattccagaagtgaagatgaagaaagggagggaacattt
gccaaaatatttaccggcgatgattcatggtcccaaaggtccggagacctcgataattct
ccaaggctacctgctgccggaaatgcagaagatcatgacactatggaagtgacagacgtc
attgaagctaacttgacgtcagaaatgggaaattcctcagatcaacatgatgaccaaaca
tatagttttaaacgttttgatatcacaacagatccttatgatcatcattttcttggtaca
agtggccagaataatgctgggaggaagtggcttaagaaagttcaacaagattggaacatc
cttcagaataacctgccagatggaatatatgtacgagtttatgaagatcacatggatctt
ctaagggctgtgattgttggagcatatgggactccttaccaagatggcttattcttcttt
gatttccaccttccacctgagtatcctgatgttccgccattagcatattatcattctggt
ggttggcggataaatccaaacttgtatgaggaagggaaggtttgtctcagccttttaaat
acttggacgggcagagggaatgaggtctgggattcttcatcttcaagtatacttcaagtc
ctagtttcacttcaagggctagtcttgaattccaggccatatttcaatgaagctggctat
gacaagcaagttgggacagctgaaggagaaaaaaattcactatcatacaacgaaaatacc
ttcttattgaactgcaagacaatgatgtatctgatgaggaagcctcctaaggattttgaa
gagcttatcagagagcactttaggatgcgtggttattacatcctcaaggcctgtgacgct
tacatgaaaggattccttattggctcactcataaaagatgcttccgtaagcaataacagc
agcgctaattcaaattcagttggtttcaagctgatgctggctaaaattgtaccaaaactt
ttcttggctctgaaagaaataggagtcgagtgtgaagagtaccaacatctccaccaattg
tag
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