Solanum lycopersicum (tomato): 101243942
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Entry
101243942 CDS
T02665
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101243942
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101243942
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101243942
Membrane trafficking [BR:
sly04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
101243942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Motif
Other DBs
NCBI-GeneID:
101243942
NCBI-ProteinID:
XP_010315639
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All DBs
Position
2:41339123..41375469
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AA seq
992 aa
AA seq
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MDSKPSPSPGRYENCKKPYLSKSVSDANSHNQSLASILNNPHAGKSDGWWWPSNSSSLPV
VPEFTPLNPLPKPGSDIARTDFLPYITSFSDPFARFNDIQQHSKSSLLDDQNGENALVAC
LREVPSLYFKEDFQLEDGATFKAACPFRTTAENLVMQEKLSQYLDVVELHLVREISLRSS
SFFEAQGQLEDLNSKIVEGCKRIRELKETIRLLDTNLVGPARKLQELNVKRGDLVALQNK
LKLIIYVNQALSTLNLLVASADCAGALDVTDDLQHLLDGDELAGLHCFRHLRDELATSID
SINSILSAEFLRITIQETGNMDAAITSKFRARATIAINGEGHEAKLDEEETSNFRDRLLP
FVIGLLRTAKLPAVLRIYRDTLTADMKTAIKTAVEELLRVLVAQPSDSDFVAGERVADTD
GGSSSLASRLRSLAPESFVQLLKAIFMIVQAHLVQASEVKKTIEWIICHLDDHYAADSVA
AAIALGAAAAETASESDGQITTFSQFSPPSNFSRGFSIQERGNDAATMSNLSRNFRADIL
RENTEAVFAACDAAHGRWAKILGVRAPLHSKLRLQEFLNIYNITQEFITATEKIGGRLGY
SIRGTIQSQAKAFVDFQHESRMAKLKAILDQENWAEIDVPDEFQTIVTSLFSSKSETSGH
ADDDSADTATSQTEVVRNSSDPSMVDAGLPNISHNTAQTDSTSTHPDSTAQNNDTKSRER
GRSSPRMLSFGGVAYHMVNCGLILVKMLSEYIDMNNSLTGLSSEVVHRVVDILKFFNTRT
CQLVLGAGAMQVSGLKSITSKHLALTSQVIGFTYTIIPEIKRILFLRVPETHKGLLMLEV
DRVAQDYKVHRDEIHSKLVQIMRERLLVHLRSLPQIVESLNRQEDNDSQPSQFARSITKE
VGLLQRVLCRTLHEVDVQAIFRQVVIIFHSQISEAFSRLDISSQQARQRAHRDVQHLLGC
IRSLPSDSKSNPPNWGPLDEFLEQNFDAEASQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaagccttccccatcaccgggaaggtatgaaaattgcaagaaaccatatttg
tcgaaatcagtatccgatgctaatagccataaccaaagcttagcatcaattcttaacaac
ccacatgctggaaaatcagatggatggtggtggccatcaaattcctcatctcttcccgta
gttcctgaattcaccccactaaacccacttccaaaacccggatctgatatagccagaacc
gattttctcccttacattacatccttttccgacccttttgcccgttttaatgatatccaa
cagcacagtaaatccagcctccttgacgatcaaaatggtgaaaatgcccttgtcgcatgt
cttcgcgaagtgccctctttgtacttcaaagaagattttcagttagaggatggtgccacc
tttaaagctgcctgtccatttaggactacggctgagaatttggttatgcaagaaaaattg
tcacagtatttggatgtagtggagctgcatttggtgagggagatttctttgcgttcaagt
tcgttttttgaggcacaagggcagctagaggatctgaattcaaagatagttgaagggtgt
aagaggatcagggaattgaaagagacaataaggctactggatactaatttggtggggcct
gcaagaaagttgcaggagctgaatgtaaagaggggtgatttggttgctcttcagaacaag
ctgaagctcattatatacgttaatcaagctttatcaactctcaatttgctagttgcatct
gcagattgtgctggagctttagatgttacagatgacttgcaacatttattggatggagat
gaactggctggtctacattgctttcgacaccttcgtgatgaattagccacttcaatcgat
tctatcaatagcattctttcagcagaatttttgcgtataaccatacaagaaactggcaac
atggatgcggcaattacatcaaaatttagagcacgggcaaccattgcaattaatggagaa
ggccatgaagctaaattggatgaagaggaaacctcaaatttccgtgaccggcttcttcca
tttgttattggattacttagaactgcaaaactacctgctgtgttgagaatatatcgtgac
actcttacagctgacatgaaaacagccattaaaacagcagttgaagagctgcttcgtgtt
ctggttgctcaaccttcagattcagattttgttgcaggagagcgagtagctgatacagat
ggtgggagctcatctcttgccagtagattgagaagcctggcaccagaaagttttgttcaa
cttttaaaggcaattttcatgatagtgcaggcgcacttagtccaggcttctgaagttaaa
aaaacaattgagtggattatctgccatcttgatgatcattatgctgctgactcagttgct
gctgcaattgcacttggagcagcagctgcagaaactgctagtgaaagtgacggtcagatc
accaccttttcacaattttctcccccaagcaacttttccaggggtttctcaattcaggag
aggggaaatgatgcagcaaccatgtcaaatttatcgagaaatttcagagctgatatattg
agagagaatacagaagctgtatttgcagcttgtgatgctgctcatggaagatgggcaaag
atccttggagttcgtgctcctcttcactctaagttgaggttgcaggagttcctaaacata
tataacatcactcaggaatttattaccgccactgagaaaattggtggaaggttggggtat
agtatccggggaaccatacaatcacaggccaaggcctttgttgatttccaacatgaatct
cgaatggcaaagttgaaggctatacttgaccaagaaaattgggctgagattgatgtcccc
gatgagttccagactattgtcacatcactgttctcttccaagtcagagaccagtggacat
gctgatgatgattctgctgacactgcaacaagccaaactgaagtggttcgaaacagcagt
gatccttcaatggtggatgctggactcccaaatatatcacataatacagcgcagactgat
tctacttcaacacatccagatagtacagcacagaataatgacacgaaatcaagagaacgc
ggaagatcatctcctagaatgctatcgtttgggggtgttgcgtatcacatggtaaactgt
ggcttgattttggtgaagatgttgtcagaatatattgacatgaataatagtttgactggc
ctatcatcagaagtagttcaccgtgttgttgacatcttgaagtttttcaatacgagaact
tgtcaacttgtacttggagctggagccatgcaggtgtcaggtttgaagtctattacttct
aagcacttggctttgacaagccaagtcatcggtttcacatacactataattccagaaatc
aagagaatactgtttctaagagtgcctgaaacacacaagggattgctaatgctggaagtt
gatcgagtcgcacaggactacaaagttcatcgtgatgaaatacattcaaagttggtacag
ataatgcgagaaagattgctggtacaccttcgaagtttgccacaaattgttgagagtttg
aataggcaggaagataatgactcacagccaagtcagtttgctcgttcaatcacaaaggag
gttggccttctccaacgtgtgttatgtcgaactctgcatgaggttgatgttcaagctatt
ttcaggcaagtggttatcatctttcactcacaaatttcagaggcattctcacgattggat
attagcagtcaacaagctcgacaaagagcgcatcgtgatgttcagcatcttcttggatgt
atcagatcattaccttctgatagtaaatctaatcctcccaattgggggccacttgatgag
tttctggaacaaaattttgatgcagaagctagtcaatag
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