Solanum lycopersicum (tomato): 101244419
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Entry
101244419 CDS
T02665
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101244419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101244419
Spliceosome [BR:
sly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101244419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-2nd_BIRD-IDD
C2H2-zf_KIN17
SNRNP27
zf-C2H2
DUF5810
Exonuc_VII_L
DUF2000
Motif
Other DBs
NCBI-GeneID:
101244419
NCBI-ProteinID:
NP_001308381
UniProt:
A0A3Q7ENM0
LinkDB
All DBs
Position
1:86275422..86281758
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AA seq
202 aa
AA seq
DB search
MDQSSNHVVGVDNTSRKKFDREEILQRARERDEEEADGRKSKSKGPPVQRKPLKPRDYQV
DLESRLGKTQVVTPIAPLSQQAGYYCPVCECVVKDSANYLDHINGKKHQRALGMSMRVER
SSLEQVQQRFESLKKRKDPGSFTVQDFDERMLKQQQEEEERKRLRREKKKEKKKEKVSEE
EPEIDPDVAAMMGFGGFKTSKK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatccagcaatcatgttgttggagttgataatacttctcgaaaaaagttcgac
agagaagagattttgcagcgtgctcgtgaacgcgatgaagaggaggctgatggtcggaaa
tcaaagtcaaaaggacctccagtgcagaggaagcccttgaaaccaagagattatcaagtg
gacctcgaatctcggttaggaaagactcaggtggttactccaattgcaccattaagtcag
caggctggatactattgcccagtatgtgaatgtgtagtgaaggattctgcaaactacttg
gaccatatcaacgggaagaagcatcaacgagctttgggtatgtctatgcgggtggagaga
tcctctctagagcaggtccaacaacgatttgaatcgcttaagaagcgcaaagatccagga
agctttactgtgcaagattttgatgagcgaatgttgaaacagcagcaggaagaggaagaa
aggaaacgtttacgtcgagaaaagaagaaagagaagaagaaagagaaggtctcagaagag
gaacctgaaatagaccctgatgttgcagctatgatgggattcggaggtttcaaaacttca
aaaaagtga
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