Solanum lycopersicum (tomato): 101244561
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Entry
101244561 CDS
T02665
Name
(RefSeq) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101244561
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101244561
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101244561
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
101244561
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101244561
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101244561
Prokaryotic type
101244561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
ADPrib_exo_Tox
PPDK_N
Motif
Other DBs
NCBI-GeneID:
101244561
NCBI-ProteinID:
XP_004235270
LinkDB
All DBs
Position
3:56409886..56424243
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AA seq
1010 aa
AA seq
DB search
MRVSIDGSTWRCIALALPYYYRAATLPSSAALLLPPSPAVSGRLFNFTRTFSVSKPMGSQ
PEVLDWPANKVRQTFISFFQGKDHKEVQSSPVVPHNDPTLLFANAGMNQFKPIFLGIVDP
NSPLSKLKRACDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAW
ELLTQVYKLPSERIYATYFGGDEKSGLPADNEARDLWLKFLPPSRVLPFDCKDNFWEMGD
TGPCGPCTEIHFDRIGNRDAASFVNNDDPTVIEIWNLVFIQFNREADGSLKPLPAKHVDT
GMGFERLTSILQNKMSNYDTDVFLPIFDAIQKATGARPYSGKVGADDVDNVDMAYRVVAD
HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGTEVLKAQQGFFSSLVKVVVEVMGDV
FPELKLRETHIRDIIADEETCFGRTLLHGIEKFKKAAQEVQGKQFSGQEAFVLWDTYGFP
LDLTQLMAEERGLVVDVDGFNVAMDAARERSRNAQSKNASGAIAMDADATAALHKKGVAA
TNDTFKFTWSQDHESEIKAIYTGTEFLESAAAGNEVGIILESTSFYAEQGGQIYDTGSLE
SPSGSFQVCNVQIYGGFILHIGSFSGQAHKFSVGDKVICKVDYNRRTLIAPNHTCTHMLN
FALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVKTEELRKIESIVNEQIKSELDVFSKEA
KLSDAKSIKSLRAVFGEVYPDPVRIVSIGQKVEDLLANPENEEWSSYSAELCGGTHISNT
REAKAFALMSEEGIAKGIRRVTAVTTYRAFEATDLASSLEQKVNEASQTDESLLEEKVTS
LNATVERAQIPTVVKTDLKAKLSVLQDRVIKAKKKIAAENIQKAVKAASEMAEAAASGGK
AYCILQIGVGLDTAAVREAVVKVMEQKGMAVLVFSKDEAAKKVLVCAGVPEKGDKCKQLN
VKDWLNAALKPLGGKGGGGKGGLAQGQATDISKVDEAMDVAASFAALKLN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagggtttcaattgacggctcgacttggcgttgtattgccttagctttaccctactac
tacagagctgccacacttccttcttccgccgccttgctgcttcctccgtcgccggcggtg
agtggacggctgtttaatttcacacgtaccttttctgtttcaaagccgatgggttctcag
ccggaagtattggattggccggccaataaggtccggcagacttttatcagcttcttccaa
gggaaagatcataaagaggttcaatccagtcctgtagttcctcataatgaccctactctt
ctattcgctaatgctgggatgaatcagtttaagcctattttcttgggtattgttgaccct
aatagtccgttgagtaaacttaagcgtgcctgcgatacacagaagtgtattcgtgctggt
ggcaagcataatgatcttgatgatgttggtaaggatacttaccatcacacattctttgag
atgcttggtaattggtcatttggggattatttcaagaaggaggcaattggatgggcctgg
gaactacttacccaggtatataaactgccaagtgaacggatttatgccacttattttgga
ggtgatgaaaaatctggccttccagcggataatgaagctagagacctatggcttaagttc
cttcctcctagcagggtgttgcctttcgactgcaaagacaacttttgggagatgggtgat
actggaccttgcggaccctgcaccgaaatacacttcgatagaattgggaatcgtgatgct
gcatcatttgttaataatgatgatcccactgtgattgagatatggaaccttgtctttatt
cagtttaatagggaagctgatggttctttgaaacctcttccagctaagcatgttgatact
ggaatgggttttgaaagactaacctctatcctccagaacaagatgagcaattatgatact
gatgtgttcttacccatatttgatgctatacaaaaggcaactggagctcgtccgtactct
ggcaaagttggagctgatgatgtggacaatgttgatatggcctatagagttgttgctgac
cacattcgaactctctcttttgccattgctgatggttcttgcccagggaatgaaggccgt
gaatatgtcctcagacgcattctacgtcgagcagtgcgctatggtacagaggttttgaaa
gcgcaacaaggatttttcagcagccttgtgaaggtggtggtagaagttatgggtgatgtc
ttcccagagctgaagttgcgtgagacacatataagggatatcattgctgatgaagaaact
tgctttggaaggacattgcttcatggaatcgagaaatttaagaaggcagctcaagaggtt
caaggaaagcaatttagtggtcaggaggcatttgtcttgtgggacacttacggatttcca
ttagatttgacccagttaatggcagaggaacgaggcttggttgttgatgttgatggtttt
aatgttgctatggatgctgccagggaaagatcaagaaatgctcagagcaagaatgccagt
ggtgctattgccatggatgctgacgctactgcagcattgcacaagaaaggggtcgctgca
acaaatgatactttcaagttcacttggtctcaggatcatgagagtgagataaaagctatc
tacactggaactgagttcttggaaagtgcagcagctgggaatgaagttggtattattctt
gagagcaccagtttctatgctgaacaaggtggtcagatatacgacactggttcactggaa
agccccagtggctcttttcaagtttgtaatgttcaaatttatggaggattcattcttcat
attggatcattcagtggacaggcacacaagttctctgttggtgataaagtaatttgtaag
gttgactataacaggcgtacattgattgctcccaatcatacatgcactcacatgttaaat
ttcgccttaaaggaagtactaggcgaccatattgaccagaaaggttccattgttcttcct
gaaaaattgagatttgacttctctcacgggaagccagtaaagacggaagagctaagaaaa
attgaatccattgtcaatgagcaaattaagtccgaattggatgtattctcaaaggaggca
aagctgtctgatgctaagagtataaaaagtcttcgagctgtctttggtgaggtgtatcca
gatcctgtgcggattgtgtcaattggtcagaaagtggaggatcttcttgctaatccagaa
aatgaagaatggtcatcctactctgctgagctctgtggtggaacacacatttctaataca
agagaagctaaggcatttgctctgatgtctgaggagggaattgccaagggaatccgaagg
gttactgctgtcacaacttatcgtgcttttgaggccactgatttggcatcctcactcgaa
cagaaagtaaatgaagcatcccagactgatgaaagcttgctggaagagaaagtaacttct
ttgaatgctactgtggagagggcacaaattcccactgttgtgaaaactgatctcaaggcc
aagctctcggtcctccaggatcgagttataaaggccaaaaagaagatagctgctgagaat
atacaaaaagccgtcaaagctgcctcagaaatggctgaagctgcagcttctggtggaaaa
gcatactgcatcttgcagattggcgtgggtttggacactgctgcagtccgtgaagcagtt
gtcaaagtcatggagcagaagggtatggcagttctggtatttagcaaagatgaagctgca
aaaaaagttttggtctgtgctggggtacctgagaaaggtgacaagtgcaagcagttgaat
gttaaagattggttgaatgcagctttgaagcccttgggaggtaagggtggaggaggaaaa
ggtggtctcgcccaaggccaggcaactgatatatcaaaggttgacgaggcaatggatgtt
gcagcatcgtttgcagctttgaaattaaattga
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