Solanum lycopersicum (tomato): 101244662
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Entry
101244662 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase ATL15
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101244662
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101244662
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
101244662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Arc
Prok-RING_1
Prok-RING_4
zf-Nse
RINGv
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
101244662
NCBI-ProteinID:
XP_004238534
LinkDB
All DBs
Position
4:62539360..62540810
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AA seq
390 aa
AA seq
DB search
MKMIIELSHGFCSISLCLFLLAMHVISQSEITPSPPPFSFDTKIKINPPTAIILVTLISV
FFAMGIVSVYVRQCADRRFAGDFELADEDSGRRGARSHGLDPVVITSFPMFFYSDVKHHK
IGKSVLECAICLNEFEDAEALRLLPKCSHVFHPNCIDAWLFSHISCPVCRANLLPDPSDF
DKIATPVYYSNSGSPDLEFGNSVTIDINNIASPEVINVAQTPVHNRPPRTNSKITGKFPR
SHSTGHSPVRPDEDRERFTLRLPEEVREKLINSGSSRAQTNSIFPSERSMPKGYRSSSVG
TGSTRINHENYERFNEEGRVDRWGFIPVPPFFSRGGSTRSSKDGNGAGDDITAVSKNLFK
TVKSPFDRIFEKNSSGEGSFDKLRSGSTSS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgataatcgagctaagccatggtttctgctcgatttccctttgtttattcctg
ctcgcgatgcatgttatatcgcaatcagaaataacaccatcaccaccaccattttcattt
gatacgaaaataaaaatcaacccacctacggctatcattttagttacacttatcagtgtt
ttcttcgctatgggaatcgtttcagtctacgtccgtcaatgcgccgaccgccgcttcgcc
ggcgacttcgaattagcagacgaagattctggacgacgcggcgctcgatcgcatggacta
gacccagtcgtaattacctctttccctatgtttttttactctgatgttaaacatcacaaa
attgggaaatcagtgttagaatgtgcgatttgtttaaacgaattcgaagatgctgaagct
cttcgacttcttcctaaatgctctcatgtttttcatccaaattgcatcgacgcttggtta
ttttctcatatttcctgccctgtttgtcgtgccaatttactccctgaccccagcgatttc
gataaaatcgccactccggtttattactcgaattccggttcacctgacctggaattcggt
aactcggtaactatagatatcaacaatattgcttcacctgaagtgataaatgtagcacaa
acacctgtacataatcgtccaccaaggacgaattcgaaaattactggaaaatttccaagg
tctcactcgacgggtcactcaccggttcgacccgatgaagatcgcgagcggtttacgtta
aggttaccggaggaggttcgagagaaattgattaattcaggttcgagtcgagcacaaacc
aactcgatatttccaagcgaaagaagtatgccaaaaggttacagaagtagtagcgtggga
accggttcaacacgtattaatcatgaaaattatgagcggtttaatgaggaaggccgggta
gaccggtgggggtttataccggttccaccattcttttcaagaggcggttcaacccgctcg
tctaaggatggcaacggagccggagatgatataacggcggtttctaagaatttgtttaag
actgttaagtcgccgttcgatcgcatttttgagaaaaatagtagtggtgaaggatcgttt
gataaacttaggtcaggtagtacaagtagttag
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