Solanum lycopersicum (tomato): 101244802
Help
Entry
101244802 CDS
T02665
Name
(RefSeq) polysaccharide lyase family 6 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101244802
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101244802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101244802
NCBI-ProteinID:
NP_001334059
UniProt:
A0A3Q7IS03
LinkDB
All DBs
Position
9:complement(1054960..1060079)
Genome browser
AA seq
362 aa
AA seq
DB search
MGNHHGRFSHSKHHHHHHNQQGPPFFVPTQQTQNTQMGIALPYANVDSNLRGLAGQAEGF
GGSSIGGRDGHVYQVLNLNDDGPGSLRDGCRKKEPLWIVFEVSGTIELRSHLSVSSFKTI
DGRGQKIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLSDYD
DGLIDITKESTDITVSRCHFSKHDKTMLIGGDSSNCGDRCMRVTIHHCFFDGTRQRHPRV
RFAKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKKVAFKYLTEKAADKEEACTG
SIKSEDDLFVCGTQAGLLSTCSENNVFNPSEFYQTWTVERPSDDLKHYLQHCTGWQCIPR
PN
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaccatggccgtttctctcacagtaaacatcatcatcatcatcataatcaa
caaggtcccccattttttgtacctacacaacaaacccaaaatacccagatgggtatagct
ttgccttatgctaatgttgattccaatttgcgtggtcttgctggtcaagctgagggtttt
ggtggttcttccattggtggtcgtgatggtcatgtttatcaagttcttaatcttaatgat
gatgggccaggatcacttcgagatggatgtcgtaaaaaagaacctttgtggatcgtcttt
gaagtttcagggactattgagctccgttctcatttgagtgtgtcctctttcaaaactatt
gacgggcgaggccaaaaaatcaaactcactgggaaagggttgaggttgaaagaatgtgaa
catgttattatctgcaatctagagtttgagggaggtagaggacatgatgttgatggcatt
cagattaaaccaaaatcgaggcatatttggatagatcgttgtagccttagcgactatgac
gatggtttaattgacatcacaaaagagagcacagatattactgtttctaggtgtcacttt
tcaaagcatgacaaaacaatgcttattggaggagattcttctaattgtggtgacagatgt
atgagggtcaccattcaccattgtttttttgacggaactagacagcggcatcctcgtgtt
aggtttgccaaagtacatttgtacaataactacactaggaactggggaatttatgctgtt
tgtgctagtgtagaatcacagatatattcacaatgcaatatatatgaagctggacaaaaa
aaggtggccttcaaatatctaacagagaaggcagctgataaggaagaagcatgtactggt
agcattaaatctgaagatgacttgtttgtttgtggaactcaggctggtttattgtctact
tgcagcgaaaataacgtcttcaatccatctgagttctaccaaacctggactgttgaacgt
cccagcgatgatctcaaacactaccttcaacattgtacaggatggcagtgtattccgcgg
ccaaattga
DBGET
integrated database retrieval system
