Solanum lycopersicum (tomato): 101244820
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Entry
101244820 CDS
T02665
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101244820
03460 Fanconi anemia pathway
101244820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101244820
03036 Chromosome and associated proteins [BR:
sly03036
]
101244820
03400 DNA repair and recombination proteins [BR:
sly03400
]
101244820
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101244820
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101244820
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101244820
FA (Fanconi anemia) pathway
Downstream FA components
101244820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Tower
Motif
Other DBs
NCBI-GeneID:
101244820
NCBI-ProteinID:
XP_010315813
LinkDB
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Position
2:19686821..19705506
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AA seq
1128 aa
AA seq
DB search
MSMWQLYSVSVNDFRWKVSGESLTEEPSLTLPPQQLQSIPDLLRQGTSRLAGNTDSTSTR
FPIFRGKPVSVKHSSISTALSILDDEDKPILDTGIGTGRQDVLTFQEAVFQKGSGEPLNA
PQSFSPSSLNKQFSMSNSLFQTASGKPVNISCTGLNKAKALLGLEENGDHETFPGSGKKN
TTPDELFGFRNSFPIVEVEGIASTGSTNVSAASLSPFDVKFNSTVCPAEELVADFLHSAG
KPPPIKFHTAGGRSITVSCEALKRAKSLLGDLELGCLVDEKDMADPLLSFSKDQKSVDQV
STKELNSDTPVSLLSAAKGSGSSSLFTSPLRSTLYHKKSSIKLENLVPASNLIKEFDAVA
KESTSRLDHSIPQNGEPFNKNSAATDLRENDIASKPKLLERPSRGPLVDISNNIGGGIAD
RNQNVGRKRKPGGSFVSPFKKPRSTSIVNPLKRNDSGAANGFSDLAPKLPSQKGKVSIRY
PFHVARLYMKEYLGKPPSILSKLESLPDDVSRMNPATAETYVFNDESCSGCIGVGSFLEM
LSQSGASMQYVSKKWITNHYKWIVWKLASYERCYSGKFSGKLLTICNVLEELKYRYEREV
NHGHRSAVKRILEGDLPPSSMMVLCVSNIYSIHVSPVGPQSSLSSTTENGTCAKVELTDG
WYSIIAVLDLQLSKKMAAGKLFVGQKLRIWGAGLCGWTGPVSPLEVSGTTSLLLHINGTY
RAHWASRLGFCKGGGIPLSFMSIKDGGGAVPLTLVVISRIYPVLFRERLSNRGFVVRSER
MEVKEMQNFNERRSSIVEGVVSESQREKRDAYIGSDYESKEGARILRILERAAEPEVLMA
EMTSEQLNLFSSYQAKLEAFRQSDMQKSLEKALQTAGLAERDVTPFMRVRVVGLTSKRTS
LKCCPKEGLITIWNPTEKQHCGLAEGQAFSVTGLTPISSDSSTLYLQTKGSTSKWLPLSP
RAVEHFESSFCPRQSISLSKLGEVPISREFDIAAVVVFVGQLYAEAHQTKQWVFVADGSK
AMLDSDDELETLMAISFTSPHIGTDSFAPINSNLVESTVCFCNVIKRARDIVNNLWVAEA
TENSTYYLNYDHSDCSHLKDAGASAERWAKISGLRLEKLRGRVLSIIS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtggcagttgtactccgtgtcggtgaatgatttccgatggaaagtctcagga
gagtctcttactgaagaaccgagcttaaccctacctccccagcagctccaatccataccc
gatctcttgcgtcaaggaacttcgagattagcagggaacaccgattcaactagtacacga
tttccaatttttcgagggaaacctgtgtcagtgaaacattcttccatatcaacagctctt
tccatccttgatgatgaagacaagccgattttggacacaggcataggaactggaagacaa
gatgttcttacttttcaggaagccgtgttccagaaaggctcaggggaaccccttaatgct
ccacaatccttttccccttctagcttgaacaaacaatttagcatgtcaaactcgttgttc
cagacagcctccggtaaaccagtcaatatatcttgtacaggtcttaataaggccaaggcg
ttgttgggcttggaagaaaatggtgaccatgaaacatttccaggttctggaaagaaaaat
acaactccagatgagctctttggttttaggaattcctttcctattgtggaagtagagggc
attgctagcacagggtctactaatgtttcagcagcttcattgtctccgtttgatgttaaa
tttaactccacagtttgtccagcagaggagttagtagcagattttctgcactctgcaggt
aaacctcctccaataaagtttcatactgctggtggtagatcaataacagtttcctgtgag
gcattgaaacgcgcaaagagtctgcttggagatctagagctgggttgtcttgttgatgaa
aaggatatggctgatccattgctttctttttcaaaagaccaaaaatctgttgatcaggtc
tccaccaaagaattgaactctgatactcctgtttccctcttatcggcagcgaaaggtagt
gggtcctcaagcctttttacatcgccattgagatcaactttgtatcataaaaagtcttca
attaaattagagaatctcgttccagcaagtaacttgattaaggaatttgatgctgtggca
aaagaaagcactagtaggctggaccatagtattccacagaatggagagccattcaataag
aactcagcagctacggaccttagagaaaatgatatcgcttcaaaacctaaattgctagaa
cggccttccaggggccctttggtggatatctcaaataacattggaggaggaattgcagat
agaaaccagaacgttggtcggaagaggaaacccgggggaagttttgtttctccattcaag
aagcctcgaagcaccagcattgtcaaccctctcaaaagaaacgattctggtgctgctaat
gggttctcagatttagcaccaaaattaccctctcaaaaaggaaaggtttcaattcgatat
ccattccatgtggcacgattgtatatgaaagagtatcttggaaagcctccatcaatcctg
agcaagttagagagtttgccagatgacgtgagcaggatgaatccagccactgctgagact
tatgtgttcaatgatgaatcttgctcaggttgcattggagtagggtcttttttggagatg
ctgtctcaatcaggagcttccatgcaatatgtttctaaaaagtggattacaaatcactat
aagtggattgtttggaaacttgcatcttatgagaggtgttacagtggcaaattttccggg
aaacttctgacaatatgcaatgtacttgaagaattaaaatacagatatgaaagagaagta
aatcatggtcatcgatctgcagttaagagaattttagaaggagacctcccaccttcttct
atgatggtactctgtgtttccaatatctattcaattcatgtctcgccagttggacctcaa
tcttcattgtctagcacgaccgagaatggtacttgtgcaaaagttgaactgaccgatggg
tggtattcaataattgctgttttagatttacaactatccaagaagatggctgctggaaag
ctgtttgttggccaaaagcttaggatctggggagctggattgtgtggctggacaggtcct
gtttcacctcttgaggtgtcagggacgactagtttactgctgcatataaatgggacatat
agagctcattgggcatctcgtttgggtttctgtaaaggtggtggtattccattatcattt
atgtcaatcaaggatggtggaggtgctgttccactaacattggttgtaatttcaaggata
tatcctgttctcttcagggaaaggttaagtaatcgggggttcgttgtaagatctgaacgg
atggaagttaaagagatgcagaattttaatgaaagacgtagtagcattgtggagggagta
gtctcagaatctcaaagagaaaagcgagatgcatacatcggaagcgactatgaaagcaaa
gaaggggcaaggattttaaggatacttgagagagctgcagaaccagaagttctgatggca
gagatgacttcagagcagttgaacttattttcatcctatcaagcgaagttggaggcattc
aggcagtctgacatgcaaaaatctcttgaaaaagctttgcaaactgctggacttgctgaa
agagacgtcactccgtttatgcgagttagagttgttggattgactagcaaacgtacatca
ttgaagtgctgtccaaaggaaggcttgattacaatatggaatcctacggagaaacagcac
tgtgggcttgcagagggtcaagctttttctgttactggtcttacaccgataagctcagac
tctagcaccctttacttgcaaacgaaagggtccacatccaaatggctgcctttgtctcct
cgggcagttgaacattttgagagctctttctgtcctcgccaatcaatttcattgagtaaa
ttgggtgaagttcctatttccagggagttcgatattgctgcggtggttgtttttgtgggg
cagctgtatgcagaagctcatcaaacaaagcagtgggtatttgtggctgatggatccaaa
gctatgttggattctgatgacgaattagaaaccttgatggccatcagtttcacctcacca
cacataggaactgattcatttgctccaataaattccaaccttgtagaatctacggtttgt
ttttgcaatgtcatcaaaagagcaagagatattgttaataacctgtgggtagctgaagca
actgaaaattcaacttattatttaaattatgatcattcagattgttctcatctaaaagat
gcgggtgcttctgctgaaagatgggcaaagatatctggtttgagacttgaaaagcttagg
ggaagagttttatctataattagctga
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