Solanum lycopersicum (tomato): 101245092
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Entry
101245092 CDS
T02665
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101245092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101245092
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101245092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
TIP49
AAA_14
AAA_2
RNA_helicase
AAA_28
nSTAND3
AAA_33
IstB_IS21
Bac_DnaA
AAA_17
AAA_18
NPHP3_N
Rad17
Mg_chelatase
Nucleolin_bd
Viral_helicase1
Parvo_NS1
AAA_3
ATPase_2
NACHT
ABC_tran
Cytidylate_kin2
NB-ARC
TsaE
AAA_19
AAA_7
AAA_11
Vps4_C
CPT
BRX
Motif
Other DBs
NCBI-GeneID:
101245092
NCBI-ProteinID:
XP_004229290
LinkDB
All DBs
Position
1:complement(73866323..73872557)
Genome browser
AA seq
821 aa
AA seq
DB search
MGRGGRGGGSGGRRSLSSSFDRELRTHIESCKNNYLSVEDLVDHLRSSYHKYSREKLQPF
TKRVQDVLQLQRSNPNSTEEVTPPKKKPKRDGSEQRLQLLEKKHIMSSQRKKQEGDGSSS
TTLASTSDSDDSYSSSSSDAIYGEKLEEKPDLMKSMLRHTYNQQVNSTPKSKKIEYEVIH
DNNDEKRKKLVMSKGGQRRNIATKDLGGGRGGGEGERFGDSEGNVDGPKFKDLGGMDGVL
EELKMEVIVPLYHPQLTKHLGVRPMSGILLHGPPGCGKTKLAHAIANETRVPFYKLSATE
LVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIAAKRENLQREMERRIVTQLMTCMD
ESHRLVKPDDAKGTALPTDKRNNEAKSDGSNGGPGYVLVIGATNRPDAIDPALRRPGRFD
REIALGIPDENARVQILSVLTRNLRVEGAFDLTKIASSTPGFVGADLAALTNKAGNLAMK
RIIDERKVELSRELSDGEDAEEWWRKPWSPEEMEKLSIFMADFEEAAKLIQPSSRREGFS
AIPNVKWEDVGGLDSLRHDFDRYIVRRIKNPKDYMGFGVDLETGFLLYGPPGCGKTLIAK
AVANEAGANFIHIKGPEILNKYVGESELTIRTLFTRARTCAPCILFFDEMDALTTKRGKE
GGWVVERLLNQLLIELDGADQRKGVYVIGATNRPEVMDQAILRPGRLGRLLYVPLPSPDE
RVLILKALARKKPVDSSVDLMTIGRDDACKNFSGADLAALMNEAAMVALEDKLTAMATSC
DDTSSVIKESHFKCALEKVSPSVSNEQIKYYQELSKHFRAA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggggaggacgcggcggaggcagcggtggacgccggtcactttcgtcgtcgttc
gatcgagagcttcgcacccatattgagtcctgtaagaacaattacctctccgttgaagat
ctcgtcgaccacctccgttcatcttatcacaagtattcccgcgaaaagttacagccgttt
accaaacgggtccaagatgttctgcagctccagcgctcaaaccctaactcaactgaagaa
gtaacgcctccgaagaagaagccaaaaagagacggcagcgagcagcgtttgcagctcctt
gagaagaagcatataatgagtagtcaaagaaagaagcaggaaggggatggttcttcgtcg
acgactctcgcaagtacttccgatagtgatgattcttattcttcttcgtcttccgatgct
atttatggagagaaattggaagagaagcctgatttaatgaagtctatgcttcgacatacg
tacaatcaacaggtcaatagtactcccaagtcgaaaaagattgaatacgaggtgattcat
gacaataatgatgaaaaaaggaagaaacttgttatgtctaaaggaggacaacgaagaaac
atagccactaaggatttaggaggaggaagaggaggaggagagggggaaaggtttggggat
agtgaagggaatgttgatggcccaaagtttaaggatttaggagggatggatggagtgttg
gaggaactgaaaatggaggtgattgttccattgtaccatcctcagctgactaagcatctt
ggagttaggcctatgtcagggatactcttacacgggccaccaggctgtggtaaaacaaaa
ctagctcatgctattgccaatgagactcgagttccattctacaaactatctgctactgag
ttggtctctggagtttcaggtgcatcagaagagaacataagggagctgttctcaaaagca
taccggacagcaccttctattgtgtttattgatgagatagatgcaattgctgccaaaaga
gaaaatttacagagagaaatggagcggcgcattgtgacacaactaatgacgtgcatggat
gagtcacatagacttgtaaaacccgatgatgcaaagggaactgctctacccactgataaa
agaaataatgaagcaaaatcagatggatctaatggtggacctggttatgtcctagtaatt
ggggcgacaaatagacctgatgctattgacccagcattgaggaggcctggacgattcgac
cgtgaaatcgccttgggtattccagatgaaaatgcaagggtgcaaattttgtctgtgctt
acacgtaacctaagagttgaaggtgcatttgatctcacgaagatagctagttcaacccca
ggatttgtcggagcagacttggctgctttaactaacaaggcaggtaacttggcaatgaag
aggataatagatgagaggaaggttgagctttcaagagaattgtcagatggtgaagatgcc
gaagaatggtggagaaagccatggtcacctgaagagatggaaaagctcagcatttttatg
gctgattttgaggaagcagctaaattgattcaaccttcatctcgaagagaaggtttctcc
gctatccctaatgttaagtgggaagatgttgggggccttgattcgttaagacatgacttt
gaccgttacattgtcaggcgtataaagaatcctaaagattacatgggttttggagtggac
ttggaaacaggattcttgctttatggtcccccgggatgcggtaaaacattaattgccaag
gctgttgctaatgaagctggagcaaattttatacacatcaagggacctgaaattttgaac
aagtatgttggtgaaagtgagctaaccattcggacattatttacccgtgcaaggacatgt
gctccatgcattctattcttcgatgagatggatgcattgacaactaagcgtggtaaggaa
ggaggttgggtcgttgaaagacttctgaatcagctactaatagaactagacggtgccgat
cagagaaaaggtgtttatgtgattggtgccacaaataggcctgaagtcatggaccaagct
attcttcgacctggaaggttagggagactcttatatgtccctctacctagtccagatgag
cgtgtactcattttaaaagctcttgcccggaagaagcctgtagattctagtgttgacttg
atgaccattggaagagatgatgcctgtaaaaattttagtggagctgacctagcagcactg
atgaatgaagctgcaatggttgcactagaagataaattgacagcgatggctacaagttgt
gatgacacatcatcggttattaaggagtcacatttcaaatgcgctttggaaaaagtatct
ccatccgtctccaatgagcaaataaaatactatcaggagttatcaaaacacttcagagca
gcatga
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