Solanum lycopersicum (tomato): 101245144
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Entry
101245144 CDS
T02665
Name
(RefSeq) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
101245144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sly03011
]
101245144
Ribosome [BR:
sly03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
101245144
Bacteria
101245144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
101245144
NCBI-ProteinID:
NP_001333380
UniProt:
A0A3Q7JFE9
LinkDB
All DBs
Position
12:68602356..68607412
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AA seq
416 aa
AA seq
DB search
MGSLAHQFVGLKCSPISTTRIVQSKKNIVNPIIIVHRKQKIVSRAGAVATTNAETRERIK
LKEMFEQAYERCRTAPMEGVAFTVEDFHSALEKYDFDSEMGTKVKGTVFSVDANGALVEI
TAKSSAYLPVQEASIHSIKHVEEAGIFPGFRDEFVVVGENEADDSVILSLRSIQYDLAWE
RCRQLQAEDVVVKGKVVSANKGGVVALVEGLRGFIPFSQIFSKSTAEELLEKELPLKFVE
VDQEQTRLILSNRKAMADSQTQLGIGSVVLGIVQSLKPYGAFIDIGGVNGLLHVSQISHD
RVSDISTILQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEAMAQT
FRQRIAQAEAMARADILKFQPESGLTLNSDGILGSLTSELPAEGLDLSVIFPAEES
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggatctttagcacatcaatttgttggattaaagtgttcaccaatttcaacaacaaga
attgttcaatccaaaaagaatattgtaaatcccattattattgttcatagaaagcaaaag
attgtgtctcgagctggggcagtggcgactacaaatgcagaaacaagagagagaatcaag
cttaaggagatgtttgaacaagcttatgaaagatgccgtacagctcctatggaaggtgta
gctttcactgttgaagattttcactctgcccttgaaaaatatgattttgactcagaaatg
ggtaccaaggtcaaagggacagtattttctgtagatgccaacggagctttagtggaaatc
acagcgaaatcatcagcatacttgcccgtacaagaggcttcgattcacagcatcaagcac
gttgaagaagctggaatatttcctggtttcagagacgagtttgtggttgttggtgaaaat
gaagctgatgatagtgtgatattgagtttgcgttcaattcaatatgacctggcatgggaa
aggtgcagacaacttcaagctgaagatgttgttgtcaaaggtaaggtggttagtgcaaat
aaaggtggagtggtggcattggtcgagggccttcgtgggtttattccattctcacagata
ttttcgaaatcaactgcagaggagcttttggagaaagaacttcctctgaaatttgttgag
gttgatcaagagcaaactagacttatactcagcaaccgcaaggccatggctgatagtcag
acacagttgggaattgggtcagttgtacttggaattgtccagagcttgaaaccatatggt
gccttcattgacattggtggggtcaatggccttcttcatgtcagccagatcagtcatgat
cgtgtgtcagatatctcgaccatccttcagcctggtgactctctaaaggtcatgatattg
agccatgaccgtgagagaggtagagtgagcctctctacaaagaagttagaacctacacct
ggtgacatgattcgcaatccaaagctcgtctttgagaaggctgaagcgatggctcagaca
ttcaggcagagaattgcccaagctgaagcgatggctcgtgctgatattctgaaattccag
cctgagagcggattgactctaaactccgatggtattttaggttcgttgacctcggaacta
cctgcagagggactggatttgagtgtaatttttccagctgaagagtcatga
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