Solanum lycopersicum (tomato): 101245162
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Entry
101245162 CDS
T02665
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
sly04517
IgSF CAM signaling
sly05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101245162
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101245162
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101245162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101245162
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sly04812
]
101245162
Membrane trafficking [BR:
sly04131
]
Others
Actin-binding proteins
Arp2/3 complex
101245162
Cytoskeleton proteins [BR:
sly04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
101245162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
EIF3I
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
RMC1_N
Beta-prop_NUP159_NUP214
eIF2A
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
101245162
NCBI-ProteinID:
XP_004238729
LinkDB
All DBs
Position
5:1371748..1382499
Genome browser
AA seq
375 aa
AA seq
DB search
MAATSVHKFAQCISCHAWSPDLSMIAFCPNNSEVHIYKLSEDKWEKVHVLQKHDQIVSGI
DWSYRSNKIVTVSHDRNSYVWNQEATGWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSIAWHPNNVLLATTSTDGKCRVFSTFIKGVDS
KDSAMGSSADTKFGEQIVQLDLCFCWAFGVRWSPSGNTLAYVGHNSMIYFVDEVGPSAAA
QSVAIRDLPLRDVLFLSERMVVGVGFDCNPMVFVADESGLWSFLRFLDERKSASSSAKYG
GSQFSEAFGKFYGQSKFSASNNVEQSRGAHDNCINCILPLAKQRKSSVTRFTTSGLDGKI
VTWDLQKQEDLLDYL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacttcagtacacaagtttgctcagtgcatttcttgccatgcttggagtccc
gacctgtccatgattgcattctgtcctaacaacagtgaagtacatatttataaactatca
gaagacaagtgggagaaggtccatgttcttcaaaagcatgaccaaattgtttctggtatc
gattggagttacagatccaacaaaatagtcactgtttctcatgaccgtaattcatatgtc
tggaaccaagaagcgacaggttgggttcctaccctggttattctcaggctgaatcgtgca
gcactttgtgtgcagtggagtccaaaagaaaacaagtttgctgtcggaagtggagctaaa
actgtttgtatatgctactacgagcaagaaaataactggtgggtgagtaagcttatcagg
aaaagacatgattcatccgtaacaagtattgcctggcatccaaataatgttcttctagca
acaacgtccactgatggtaaatgtagagtattttcaacattcattaaaggcgtcgattca
aaagactctgccatggggagttctgcagataccaaatttggagagcaaattgttcagctt
gatctatgcttttgctgggcttttggtgtcagatggtccccaagtggcaacaccttagca
tatgtaggtcataactccatgatatactttgttgatgaagttggtccctctgctgcagca
caaagtgtagcaatccgtgatttgcctcttcgtgatgtattgtttctttctgaaaggatg
gttgttggagtgggatttgattgcaacccgatggtatttgtggcagatgaaagtggactc
tggagtttcttgagattcctcgatgaacggaaatcagcgtcttcaagtgccaaatatggt
ggatcacagttttcggaagcatttgggaaattctatggtcaatcaaagttttcagccagc
aacaacgttgagcagtcaagaggcgctcatgacaactgtatcaattgcatattaccactt
gcaaaacagagaaaatctagtgtcacccgtttcaccacttcaggacttgacgggaagata
gtgacatgggatttgcagaaacaagaagatttattggactatctatga
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