Solanum lycopersicum (tomato): 101245268
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Entry
101245268 CDS
T02665
Name
(RefSeq) DNA repair protein XRCC3 homolog
KO
K10880
DNA-repair protein XRCC3
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101245268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101245268
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
101245268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
ATPase
DUF7125
AAA_22
DnaB_C
HTH_50
Motif
Other DBs
NCBI-GeneID:
101245268
NCBI-ProteinID:
XP_004243278
UniProt:
A0A3Q7HD90
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Position
7:65776728..65777778
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AA seq
285 aa
AA seq
DB search
MKPEDLLQRLSPTHTQKCTVGCLVLDRLLGGGIPCNSITELVAESGCGKTQISLQLLLSA
QLPTSLGGLSGSSIYLYSESPFPVRRLHQLSSSFPTLHNPLGKILTHPLHSAHHLFDVLS
QLDSLLSSRLDSPSQIKLIVIDSIAALFRFEFENNPRDLKQRSGLFFRISSKLKEQARRF
GLAVVVINQVVDVMNDTDGLRIGNSTCWYTSERKVCAALGLSWANCVNTRLFLSRQEERV
AREVNGDDCFSTQTRRFIRVAFAPHLPDSYCEFVISREKIFGLER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagaggatctccttcagcgtctcagccccacccacacccagaaatgcaccgtc
ggctgcctggttctcgaccgcttactcggcggcggcattccttgcaactcaataaccgaa
ttagtcgccgaaagtggatgtggcaagacccaaatctccctccagcttctcctctccgct
caactccccacttcactcggcggcctctccggttcctctatatacctttactccgaatca
cccttccccgtccgccgcctccaccaactctcctcctctttccccactctccataacccc
ttaggtaagatcctaacccaccctctccactctgctcaccacctgttcgacgtattgtct
caactagactccttattatcctcccggcttgactcaccttcccaaatcaagctcatcgtg
atcgactccattgcagctttgtttcgatttgaatttgaaaacaacccgcgtgatctcaaa
cagagatcgggtttgtttttcaggatttcgagcaaattgaaggagcaagctagacggttt
gggttggctgtagtggtgattaatcaagttgttgatgtgatgaatgatactgatggactg
aggattgggaattcaacttgttggtatacatctgagagaaaagtatgtgccgcattgggc
ttgtcatgggcaaattgtgttaatacaagattgttcttgtccaggcaagaagagagggtc
gctcgagaggtaaatggagacgattgctttagtacacaaacgcggagatttatacgcgtt
gcatttgctcctcatcttcctgattcttactgtgagtttgttattagtagagaaaagatt
tttggtttagaaagataa
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