Solanum lycopersicum (tomato): 101245277
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Entry
101245277 CDS
T02665
Symbol
ABCF4
Name
(RefSeq) ABC transporter F family member 4
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sly03012
]
101245277 (ABCF4)
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101245277 (ABCF4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
PWI_ABCF3
SMC_N
AAA_15
AAA
AAA_22
NACHT
AAA_29
AAA_16
nSTAND_NTPase5
AAA_28
ORC-CDC6-like
nSTAND3
DUF5906
RsgA_GTPase
MMR_HSR1
ATP-synt_ab
AAA_25
AAA_23
Motif
Other DBs
NCBI-GeneID:
101245277
NCBI-ProteinID:
NP_001353370
UniProt:
A0A3Q7HX06
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All DBs
Position
8:67731003..67739291
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AA seq
716 aa
AA seq
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MTEVASNVVHEILGGRAQDVDQPIIDYIINVVADEDFDFGHDGEGAFEALGELLVDSGCV
TDFSECRAVCSKLSEKLEKHELAKPQPTVRSLKMPLRMFDGMDEEEAPKNKKPEPVDGPL
LTERDKIKIERRKRKEERLREAEYQEHLKEVEEVKAGMPLVCVNHDGQGDGPTVKDIRME
NFNISVGGRELIVDGSVTLSFGRHYGLIGRNGTGKTTLLRHMAMHAIDGIPRNCQILHVE
QEVVGDNTSVLQCILNTDMERTQLLEEEARLLELQRVTDLEGESAKSDKLNGGIDKNSQA
KRLEEIYKRLDFIDAYSAESRAATILSGLSFSPEMQKRATKTFSGGWRMRIALARALFIE
PDLLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNSVVTDIIHLQNQKLSTF
KGDYDTFERTREEQVKNQQKAFEANERTRAHMQTFIDKFRYNAKRASLVQSRIKALERIG
RVDEVINDPDYKFEFPSPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRVAMVG
PNGIGKSTILKLISGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCFPGV
PEQKLRGHLGSFGITGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDA
VEALIQGLVLFQGGVLMVSHDEHLISGSVDQLWAVSEGRVTPFDGTFQDYKKILQS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtcgcgagcaacgttgtacacgaaatcctaggcggacgagctcaagatgta
gatcagcctattatcgactatattatcaatgtcgtcgccgatgaagatttcgattttggt
cacgacggtgaaggtgcttttgaagcccttggagagctacttgtcgattccggttgtgtt
actgacttctccgaatgtcgtgcggtttgtagcaagttgtctgagaagttagagaagcat
gaattggctaaaccccaaccgacggtgagaagcttaaaaatgccgctgagaatgtttgat
ggaatggatgaagaggaagctccaaagaataaaaagccagaaccagttgatggtcctttg
ctcacagaacgtgacaagattaagattgaaagaaggaagaggaaagaggaacgcctgaga
gaggcagaataccaagaacacttgaaagaagtggaggaagtgaaagctggtatgccttta
gtgtgtgtgaatcatgatggtcagggtgatggaccaactgttaaggatatccgtatggag
aacttcaatatatctgtcggtggtcgtgaacttattgtcgatggttctgtcacgctttct
tttggaagacactacggtcttattggaagaaacggtacagggaaaacaactctcctgagg
catatggctatgcacgctattgatggtattcccaggaactgccagatattgcatgttgag
caagaagtggttggtgataatacctcagttttgcaatgtattcttaacactgatatggag
agaacccaacttctggaagaagaggctcgtctgcttgaattacagagagtgaccgactta
gaaggcgaatctgcaaagagtgataagttgaatggaggtatcgacaaaaattcgcaagca
aaaaggcttgaagagatatacaaaagacttgatttcattgatgcttactcggctgagtca
cgtgcagcaactatactatcgggtttgagcttctctccagaaatgcaaaagagagcaacc
aaaacattttctggaggatggagaatgagaatcgctcttgctcgggcattgttcattgaa
cctgatctattgttgcttgatgaacccacgaatcatcttgatctgcatgctgtcttatgg
ctggaaagttacctggtgaagtggccgaagacatttatagttgtgtctcatgctagagag
ttcttgaattctgtagtcacagatatcatccatctacaaaatcagaaattgagcaccttt
aaaggagactatgatacatttgaaaggacacgagaagaacaagttaagaatcaacagaaa
gcattcgaggcaaatgaacgtacaagggcccacatgcagacctttattgacaagttcagg
tacaatgcaaagcgtgcatctcttgttcagtctagaattaaggcactggaacgaattggt
cgtgtggatgaagtcatcaatgatcctgactacaagtttgagttcccttctcctgatgat
agacctggcgctcctattataagcttcagtgacgcatcctttggatatcctgggggacca
atattgttcaaaaatttgaattttggaatagatttggatagcagagtagcaatggttggt
cctaatggtattggaaagtcaacaatacttaagcttatttctggggagcttcaaccaacc
tcagggactgttttccgctctgctaaggtccgtattgctgtatttagtcagcatcatgtt
gatgggctggatctgtcctcaaatcccctcttatacatgatgcgttgctttccaggagtg
cctgaacaaaaattacgtggtcatctaggttcatttggtataaccggaaatcttgctctt
cagcccatgtacactttatctggtggccaaaaaagcagagttgcatttgcaaagataact
ttcaagaaacctcacatattgcttcttgatgagccgtcaaatcacttggatctggacgct
gtggaagccttgatacaaggtcttgtcttgttccaaggaggcgtcctgatggtcagtcac
gatgaacatttaatatctggcagtgttgatcaactctgggctgtctctgagggcagagtg
acgccttttgacgggacattccaagattacaagaaaatattgcaatcataa
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