Solanum lycopersicum (tomato): 101245289
Help
Entry
101245289 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101245289
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101245289
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101245289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
vWA-TerF-like
zf-C3HC4_2
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3H2C3
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101245289
NCBI-ProteinID:
XP_004247214
LinkDB
All DBs
Position
9:60933457..60947821
Genome browser
AA seq
420 aa
AA seq
DB search
MGNQESALNDAHSDHYHHSPERVRNHIGSNPQYHPTTYAESSMDSNYQAQVTSYTGGSDR
ANYQRNQQASYIADNFKSLDEVVTALREAGLESSNLILGIDFTKSNEWTGKSSFNRRSLH
SVGHTANPYEQAISIIGRTLSPFDEDNLIPCFGFGDATTHDQHVFSFYPDHRPCDGFEEA
LTRYKEIVPYLKLSGPTSFAPIVNAAIDIVEANNGQYHVLVIIADGQVTRSLDTPHGSLS
PQEQATVNSIVAASEYPLSIILVGVGDGPWDEMKRFDDNIPQRAFDNFQFVNFTKIMSER
SEMAKKETAFALAALMEIPFQYRATQRLRFRESNRGPRTRPLPPPREVIDHDVAVKSVPH
VTSYEPVDSGAAEQVCPICLTNPKDMAFGCGHLTCKECGATIQLCPLCREPIKTRIRLYS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcaagagtctgccttaaatgacgctcatagtgatcattatcaccacagccca
gaacgtgtaagaaatcatattggctccaatcctcaatatcatcctactacatatgcagaa
agctccatggattctaactatcaagctcaagttacatcatacaccgggggttcagataga
gcaaactatcaaaggaaccagcaagcctcttacatagctgataactttaaatctttggat
gaggttgttaccgcattgcgagaagcaggccttgaatcgtcaaacttgattcttggaatt
gatttcaccaaaagcaatgaatggacagggaagtcttcattcaacaggagaagcctccac
tcagttggtcacacagccaacccatacgagcaagccatctctataattgggcgaaccttg
tctccttttgatgaagacaacctgataccatgttttggatttggtgacgcaaccacacac
gatcagcatgtgtttagcttttaccctgatcatcggccttgcgatggatttgaggaagct
cttacaagatataaggaaattgttccttatctgaaattatcaggtccaacttcatttgcc
ccaatagtcaatgctgcaattgatatagtggaagcaaataatgggcagtatcatgtcctt
gtcattatcgcagacggacaggtaacaaggagtcttgacactccacatggaagccttagc
cctcaagaacaggctacagtaaattccattgttgctgctagtgaatatcctctttcaatt
attctcgttggtgttggagatggcccatgggatgaaatgaaacggtttgatgataacatt
ccacaacgggcatttgataacttccagttcgttaattttacaaagatcatgtctgagcgt
tcagagatggccaagaaggaaacagcctttgctcttgctgcactaatggaaattccattt
cagtaccgagccacacaacgccttcgattcagggaaagcaatagaggccctcgtacaagg
ccattacctcctcctcgtgaagtaattgatcatgacgttgctgtcaaatcagtaccacat
gtgacaagctatgaacctgttgactcaggagctgcagaacaagtttgtcctatttgcttg
acaaacccaaaggacatggcttttggatgtggtcatctgacatgcaaggagtgtggtgcc
acgatacaattgtgtcctttatgtcgagagccaattaaaactcgcataagactatatagc
tag
DBGET
integrated database retrieval system
