Solanum lycopersicum (tomato): 101245328
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Entry
101245328 CDS
T02665
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101245328
Membrane trafficking [BR:
sly04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
101245328
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GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
MRP-S27
ECSIT_N
Motif
Other DBs
NCBI-GeneID:
101245328
NCBI-ProteinID:
XP_004251386
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Position
11:complement(58605013..58610403)
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AA seq
479 aa
AA seq
DB search
MRMLSHHFSSKDLLVLVMCSSARLSKAEPLSAWYKFKSHYHTQQPEQDRKQRQADEEHKQ
NTNQGPSIGSPARVQKLIASQSDPLLAKEIFDLASREPDFQHSYATFHTLILKLGRSRQF
SLMQSVLSSLKSQHYSISPSLFSHIIQIYGDAGLPDRALKTFYTILEFNMKPLPKHLNLI
LEILVTHRNFLRPAFDLFRSAHTYGVLANTESYNILMRAFCLNDDLSIAYSLFNQMFKRE
ISPNVESYRILMQGLCRKSQVNTAVDLLEDMLNKGFVPDALSYSTLLNSLCRKKKFKEAY
KLLCRMKVKGCNPDIVHYNTVILGFCREGRAADACKILEDMPSNGCLPNLVSYRTLVGGL
SDQGMYDEAKNYMVEMMSKGFSPHFSVVHAVVKGFCNLGKIEEACGVAGSILSHGEPLHT
DTWEEIVSIILEWDAAEKIGNTLVQLIQAEIKPETRIVEAGARLGEYLMNNIKSKSRKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgctttcacatcacttcagctccaaggacctcttggttctggtaatgtgttct
tccgctcggctatcaaaggccgagccactttctgcctggtacaagtttaaatcccattat
cacacacaacagccagagcaagatagaaaacaaagacaagcagatgaagaacataaacaa
aacacgaaccagggaccatctattggctctccagctcgagtccagaagcttattgcttcc
caatcagatccactccttgctaaagaaatttttgatttagcctcgcgagaacccgatttt
cagcactcctatgctacttttcacacccttatcctcaagcttggccgttcccggcagttc
tccctcatgcagtccgtcctctcttcccttaagtcacagcattattccatctccccatct
cttttttcgcacatcatccaaatatatggtgatgctggcctacctgacagagcccttaaa
actttctatactatcctggaattcaatatgaagccccttccgaagcatctcaacctcatt
cttgaaatcctcgtaactcatcggaactttcttcgccctgcatttgatctcttcagatct
gcacatacatacggagttttggccaacactgagtcctacaacattctaatgcgggcattc
tgtttgaatgatgatttaagtattgcctactcgctgtttaatcaaatgtttaagagagag
atcagtcctaatgtagagtcatataggattctgatgcagggtttgtgtcgaaaaagtcaa
gtgaatacagctgttgacttgctggaggatatgctgaataaaggttttgttcctgatgct
ttaagttatagcactctattgaacagcttgtgtcggaaaaagaaatttaaggaggcttac
aagcttctttgcagaatgaaagtaaagggttgcaatcctgacattgtccattacaataca
gtcattttgggattctgtcgagaaggtcgtgctgctgatgcctgtaaaatccttgaggac
atgccatcaaacgggtgtcttcccaatttggtgtcttataggacattagttgggggtctt
agcgatcagggaatgtatgatgaggctaagaattacatggtggaaatgatgtcaaaaggc
ttctctccgcatttttctgtggttcacgctgttgtgaaaggtttctgtaacctaggtaaa
attgaggaagcttgtggagtagcggggagtattttgagtcatggtgaacccctacataca
gatacatgggaagaaatcgtatccattatcttggaatgggatgcagctgaaaaaataggg
aataccttggtgcaacttattcaagctgagataaaacctgaaacgagaatagtggaggct
ggcgctaggttgggtgaatatttgatgaacaacataaaaagtaaatcaaggaagggttga
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