Solanum lycopersicum (tomato): 101245491
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Entry
101245491 CDS
T02665
Name
(RefSeq) nuclear transport factor 2
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101245491
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101245491
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
101245491
NCBI-ProteinID:
XP_019071238
UniProt:
A0A3Q7I3Y2
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Position
9:50981786..50990230
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AA seq
474 aa
AA seq
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MAAAQPPVSAQVVGNAFVQQYYHILHHSPGLVFRFYQDISKLGRPEDDGSMSITSTMQAI
NDKILSLNYADFRAEIKSVDSQESFNGGVHVLVTGYLTGKDNLIRNFSQTFFLAPQDRGY
FVLNDMFRYVEIANQQDAVQVPETDVLAPVTPEQIVVDPSPAQENHISDQSTPSAEEANG
GEVYNPPQNDNVPDMVEEVPVAEVVDEVQGDSTMVAETNIIIEEVPKKSYASIVMHLKES
AATFSPPPAPAPRKIVPKNVEHVRQLLAPAPADSPALSSDFVDNVNNQEGEADGHSIYIK
GLPMSATTAMLEDEFKKFGPIKNGGIQVRSNRQQGFCFGFVEFEVETAVQKAIEASPILI
GGRQAAVEEKKSTSSRGNTRGRYPSGRGNGVRNDGVRGRGNYGGSGRGYNRGDFNGRSEF
NNRGGNRGGSSNRGGGDGFQRSDNMGGNNWRMNRGGGMANGTAKNMTPRISATA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctcaaccacctgtgtctgctcaagttgtgggaaatgcatttgtgcagcag
tattatcatatacttcaccattcaccagggctggtatttaggttttatcaggatattagc
aagcttggtcgccctgaagatgatggctccatgagcattacgtccacaatgcaagctatc
aatgataagatactgtcacttaactatgcggacttcagagcagagattaagtctgtggat
tcccaagagtccttcaatgggggagtgcatgtccttgttactggatatttgactgggaaa
gacaacttgatccgaaatttctctcaaactttcttcctggctccgcaagaccgagggtac
tttgttttgaatgatatgtttcgatatgtggagattgccaatcaacaagatgctgtacaa
gttccagaaactgatgtgttggctcctgttactccagagcaaattgttgtagatccctct
ccagctcaggagaatcacatttctgatcagagcacaccatctgctgaggaagctaatggg
ggagaagtttacaatcctccccagaatgataatgtgcctgatatggtagaggaagtgcca
gtggctgaggttgttgatgaagtgcaaggtgactcgacaatggtagctgaaactaacatc
ataattgaagaagttccaaagaagtcttatgcttcaattgtcatgcatctaaaggaaagt
gctgcaactttctcccctcctccagcgcctgctcctaggaagatcgtacctaagaatgtt
gagcatgttagacaacttcttgcaccagcaccagctgatagccctgctttaagctctgac
tttgttgataatgtgaacaaccaagagggagaagctgatggtcactccatctacatcaaa
ggtctacctatgagtgccaccaccgccatgctagaagacgagttcaagaagtttggacct
ataaagaatggaggcattcaagtccgaagtaacagacaacagggattttgttttggcttt
gtggaatttgaggtggaaactgctgtgcaaaaagcaattgaggcttctccaattttaatt
ggtggacgccaagctgccgttgaagagaagaagtccaccagttctcgaggtaacactagg
ggtagatatccatctggaaggggtaatggagtcagaaatgatggagtacgtgggcgaggt
aactatggaggcagtgggaggggctataatcgtggtgatttcaatggaagaagcgagttc
aacaacagaggtggcaatcgcggagggtcatccaatcgtggaggtggtgatggctttcag
cgaagtgacaacatgggaggcaacaactggcgaatgaatcgtggtggtggtatggcaaat
ggaactgccaagaatatgacaccacggatttctgctacagcttga
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