Solanum lycopersicum (tomato): 101245584
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Entry
101245584 CDS
T02665
Name
(RefSeq) ras-related protein RABH1b
KO
K07893
Ras-related protein Rab-6A/C/D [EC:
3.6.5.2
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101245584
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101245584
04031 GTP-binding proteins [BR:
sly04031
]
101245584
Enzymes [BR:
sly01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
101245584
Membrane trafficking [BR:
sly04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
101245584
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
101245584
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101245584
Exosomal proteins of bladder cancer cells
101245584
GTP-binding proteins [BR:
sly04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
101245584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
MMR_HSR1
RsgA_GTPase
FeoB_N
ATP_bind_1
TIR_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
101245584
NCBI-ProteinID:
XP_004229706
UniProt:
A0A3Q7EJA4
LinkDB
All DBs
Position
1:complement(79110558..79116236)
Genome browser
AA seq
208 aa
AA seq
DB search
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK
QEDMVDVNLKSSNSNAAQSQAQSGGCAC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtttcggctctcgcaaagtacaagctcgttttcttaggagatcaatctgtc
ggcaagaccagtattatcacgcgattcatgtatgataaattcgataacacctatcaggcc
acaattggtattgacttcctatcgaagactatgtacctggaagatcgtacagtaagattg
cagttatgggatactgcaggtcaagagagatttaggagtctcattcccagctatattagg
gactcctctgttgctgtcattgtgtatgatgttgcaagcaggcagtcctttttaaacact
tcaaagtggattgaggaggtccgaactgagaggggcagtgacgttattattgtccttgtt
ggtaacaaaaccgatcttgttgagaaaaggcaagtttcaattgaggaaggagaagcgaaa
gctcgcgaactaaatgtgatgtttattgaaaccagtgcaaaggctggcttcaatattaaa
cctctttttaggaaaattgcagcagcattgccaggaatggagacactatcttcggctaag
caagaagacatggttgatgtcaatctcaagtcaagcaactcaaatgcagcccaatcacag
gcacaatcaggaggatgtgcttgttaa
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