Solanum lycopersicum (tomato): 101245688
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Entry
101245688 CDS
T02665
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101245688
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101245688
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
F-box-like
F-box_5
LRR_4
LRR_At1g61320_AtMIF1
F-box
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
101245688
NCBI-ProteinID:
XP_010325826
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All DBs
Position
9:5205027..5208864
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AA seq
467 aa
AA seq
DB search
MDNLPAELLLDILGRIKRTTDRNSVSLTCKRFNKLDNGLIISIRVGCGLHPVCDALTALC
NRFHNLEKVEIIYSGWMSKLGKQLDDNGLLILSRCCPLLKDLVLSYCTFITDAGLSYLAS
CSKLKSLKLNFAPRITGCGILSLVVGCKALSVLHLIRCLSVSSMEWLEYLGKHEMLEDLC
IKNCRVIGEGDLIKLGPTWRKLKRLQFEVDANYRYMKRYDRLAVDRWQKQSIPCENMLEL
CLVNCVISPGRGLACVIGKCKNLEKIHLDMCVGVRDCDIVCLAQKSSNLRSISLRVPSDF
SLPLLQNNPLRLTDESLKAVAQNCSLLDTVRLSFSDGEFPSFSSFTLNGILMLIQMCPIR
ELALDHVYSFDDIGMLALRSAEYLQILELVRCQEITDDGMQLASQIPQLCTLRLRKCLGV
TDDGLKPLVGAYKLDFLVVEDCPQISERGVQGAAKSVTFKQDLSWMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggataatttaccagctgaattacttctggatatattgggaaggattaaaagaactact
gataggaactctgtatccctaacttgcaaacgcttcaacaaattggataatgggctgata
atatctatacgcgtagggtgtggtttacatcctgtctgtgatgcattaaccgctctatgc
aacagattccataacttggagaaagtggaaattatttactctggttggatgtctaagtta
gggaagcagttggatgataacggtcttctcatcctttcacgttgttgccctttgctcaag
gacctcgtgttgagttattgtactttcataacggatgctggtcttagttacttggcttct
tgttcgaaacttaaatccttgaagttgaactttgctcccagaattactggttgtggcatc
ctgtctcttgttgtgggctgcaaagcccttagtgtgcttcacctgattagatgtcttagt
gtcagtagtatggagtggctagaatatcttggaaaacatgaaatgcttgaagatctctgc
atcaagaattgtagggttatcggagaaggtgatttgattaagcttggacctacttggaga
aaattgaagagactgcaatttgaggttgatgccaactacagatatatgaagcgttatgac
cgtttggcagttgaccggtggcaaaagcaatcgatcccatgtgagaacatgcttgaactt
tgtttagtgaactgtgttatcagccccgggagagggcttgcatgcgtaatagggaaatgc
aagaatttggaaaaaattcacttagacatgtgtgttggggttagggactgtgacatagta
tgtttggcccagaaatcaagcaaccttcgatcaatctctctccgagttccatcagacttc
tcgcttcctctgctacaaaacaatccattgcggttaacagatgaaagtctaaaggcagtg
gctcagaactgctctttgcttgatacggttaggttgtctttctctgatggagagttccct
tcattttcttcctttactttgaatggaatacttatgttaatacaaatgtgtccaataaga
gaactcgctcttgaccatgtgtattcttttgacgatattggaatgctagctcttcgttca
gcagaatatctccaaatcttggaacttgtaaggtgccaagaaatcactgatgatggaatg
cagcttgctagccaaattcctcaattatgtacattacggttgaggaagtgtttgggagtg
accgatgatgggttgaaacctctcgtcggggcttacaagttagactttttggttgtagag
gattgtccacagatatcagaaaggggagttcaaggagctgcaaagtctgtcacattcaag
caagatttgtcatggatgtactaa
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