Solanum lycopersicum (tomato): 101245750
Help
Entry
101245750 CDS
T02665
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101245750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101245750
03036 Chromosome and associated proteins [BR:
sly03036
]
101245750
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101245750
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101245750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101245750
NCBI-ProteinID:
XP_004236952
UniProt:
A0A3Q7FVJ8
LinkDB
All DBs
Position
4:1584420..1597497
Genome browser
AA seq
994 aa
AA seq
DB search
MFGSTNAFGQSSSSPFGSQSGFGQTSNNPFAPKPFGSTNPFGSQSGASFFGSTSTGVFGT
PQSSSPLGSTSVFGASSSPAFGASTTTFGSSSPAFGSSSVFGQKPAFGGFGSSSAQTSPF
GSSFQQSQPAFGSGLFGSSTPFGTSSQPAFGTPSTPTFGSSTTPAFGAPTSTPAFGTSST
PAFGSTPNPTFGSTSSPFGVTNPPVFGSGTPSFGTTTSSAFGSTSTPAFGTPSAPSFSFG
SSPAFGQSTSAFGSSPFGTTTSAFGAQSSAFGAQTSASSFGNPSFGQSAVGGQRGGTRVA
AYQATPDADNSSGTQPAKLESISAMPVYKEKSHEELRWEDYQLGDKGGPAPAGQSTGGIN
FGSSAFASSSTSPFGQSSANPFTSSTSSNPFAPKPSTFSTPNFGVPTTPAFNTSAFPSSN
TSNPFGSTSSTSPSLFGSTSAFGQSTSPTLFGSASASGFGSSTSIFGSSSAQNTASAFGP
SLSFGNTQSSPLFQSTTPSFGQTNSAFGQTTSSFAQTTPAFGQSNLFSTPSTGFGSNLFS
SAPLLNTSSTMGFGQTTPSLSTPFQLTQPSQSSAFGFNNFGQTQGAAASGFGGTPSLFSQ
PPAIQSSVVAQPSVVTNPFGTLPAMPQMSIGRTGTSSSIQYGISSLPVVDKPVPVRISSL
LTSRHISQRRVRLPARKYHPKTEGTKVPFFSDDDETPSTPKADALFVPRENPRALVIRPV
DQWPSRGGVEKVSPSKHMSIPAHENGKTAEVVCAPVNEASAKDKNKDPVENGLDKEGLDS
TKLNQKPNGLHEGQHLRKGGGSSITLTGHRAGEAAIVYEHGADIEALMPKLCHSDYYTEP
RIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFIGETDVRRLDLESLIQFNNREVIVYM
DESKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTEGPRIEKYKEMLKRKAGDQGAEFVS
YDSVKGEWKFKVQHFSKYWLHEDNEDEYSEYFDA
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtccacgaatgctttcgggcagtcatcttctagcccatttgggtcacaatca
ggtttcgggcagacaagtaataacccatttgctccaaaaccttttggcagtacaaatcca
tttggttctcaatcaggtgcttccttttttggtagcacttccactggagtgtttggaacc
ccccaatcttcttcacctctggggtctacatcagtttttggtgcatcatcctcacctgca
tttggagcttctactaccacttttggcagttcatcaccagcatttgggagttcatcagta
ttcggtcaaaagccagcttttggcggctttggttcaagcagtgctcaaacaagtcctttc
ggcagctcgtttcaacaatcacagccggcatttgggagtggtctattcggctcatctaca
ccttttggtacttcaagtcaacctgcatttggtactccgagtactccaacatttggttca
tcaacgacccctgcttttggtgccccaacgagtacaccagcttttggtacatcaagtact
ccagcctttggttctacacctaatccaacctttggcagtacaagcagcccatttggtgtg
acaaatcctcctgtttttggatctggcactccgtcctttggtactaccacttcttctgcc
tttggctccacatcaactcctgcttttggtactccaagtgctccttcgtttagttttgga
tcctctcctgcatttggccaatcaacatctgcttttggcagtagcccgtttggcacaaca
acgtcagcttttggtgctcaaagttctgcctttggagcccaaacttctgcatcatctttc
ggaaaccctagttttggacaatctgccgttggtggtcaacggggcggaacacgagttgct
gcttaccaggcaacacctgatgcagataattccagtggtacccagcctgcgaaactagag
tctatttcggccatgccagtttacaaagaaaagagccatgaagaacttaggtgggaggat
taccagttgggagacaagggaggtcctgctcctgcgggtcaatcaactggtggaatcaat
tttggaagctcagccttcgcatcatcatcaacttccccttttggccaatcatctgcaaat
ccatttacgtcctctacatcttccaacccttttgcccccaaaccatccacattcagtact
ccaaattttggagtcccaactactccggcttttaatacctctgcctttccaagctcaaat
acatctaatccttttggctctacatcctcgacttccccttccttatttggatcaacttca
gcttttggacaaagtacatctccgaccctctttggatcggctagtgcttcgggttttggg
tcatcaacatcaatttttggctcctcgtctgctcagaatactgcctcagcatttggtcct
agcttaagctttggtaacacccaatcatcaccgttattccaatcaactaccccttcattc
ggacagacgaactcggcctttggacagaccacatcatcttttgcccagactacaccagct
tttggtcaatccaatttgtttagtacaccttctactggctttggtagtaatctgttttca
agtgcaccactgctaaatacaagcagtacaatgggatttggccaaacaacgccctctcta
tcaactccttttcaactgactcagccttctcagagttctgcttttgggttcaataacttt
ggtcagacacaaggagctgctgcaagtggttttggtggcactcccagccttttcagtcag
ccgccagctatccaaagctcagttgtcgcacaaccttcagttgttactaatccatttgga
actttaccagcgatgcctcagatgtcaattggtcgtactggcacttcttcttctatacag
tatgggatttctagtttaccggtggttgacaaacctgttcctgtccggatatcatcatta
ctaacttctcgacacatttctcaaagacgggttaggttgccggcaaggaaatatcatcct
aaaactgaggggactaaggtaccgttctttagtgatgatgatgaaacaccaagcacacct
aaggcagatgcattgtttgttcccagagagaatccaagagctttagtaattcgtccagtg
gaccagtggccttcgagaggtggtgtggagaaagtatcaccatcaaagcacatgtctatc
ccagcgcatgagaatggtaaaactgctgaagttgtttgtgctccagttaacgaggccagt
gcaaaagataaaaacaaagatccggttgagaatggccttgataaagagggcctcgatagt
accaaactgaaccagaaacctaatggtctccacgaagggcaacatctccgaaaaggagga
gggtcttccattacccttactggccatcgagctggtgaggcagcaattgtttatgaacat
ggggctgacattgaggctctgatgccaaagctctgccattccgattattacacagaacca
cggattcaggaattggcagccaaagaaagagctgaacctggcttctgtcgccgtgtgaag
gattttgtggttggaagacatgggtacggtagcatcaagttcataggggaaacagatgtc
cgtcgtcttgatcttgagtctcttatccagtttaacaatcgggaggtgatagtctatatg
gatgaaagtaagaaacctcctgtcggccaaggtcttaacaagcctgctgaggtgacactt
ctcaacataaaatgtttcgataagaagaccggacaacagtatacagagggtcctagaatc
gagaaatataaagaaatgcttaagaggaaggcaggagatcaaggtgctgaattcgtgtca
tatgattccgtcaaaggagaatggaagttcaaggtgcagcatttcagcaaatattggctt
catgaagacaacgaagatgaatatagcgaatattttgatgcctag
DBGET
integrated database retrieval system
