Solanum lycopersicum (tomato): 101245828
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Entry
101245828 CDS
T02665
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
sly
Solanum lycopersicum (tomato)
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
101245828
NCBI-ProteinID:
XP_010318187
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Position
3:complement(52282179..52302104)
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AA seq
1217 aa
AA seq
DB search
MLESRNNMNESVNNKENVVGSGGGLTAEQKARISSKFRAAKALLARKRPLHDCSTTSLDK
VGKAQRTTSLDRIDGDKRFPLTEIPMNTPSPIYEKGSNKTFNVFTSVKGSQVRECGSSIN
ARTTREIQFQTVETFKFSSNRSESVESNLSENGGSVQVENMVGLNTYITPVRQPGFSGLT
ESSFSSTVLDDDFDEHILDEIDALCEQNSKEKPGKRFNSIPIENHHINNLDKEDNLNAVV
SSDNSGQECILSRGNQESEAERSKSSGPDNSNLVRSDEAFKLECILNSTGNQECELEDPK
SCKATDTGSKLEATDIRNMPEDYIKYVESLNDRQQEAACSDISIPLIIVAGPGSGKTSTM
VGRVLMLLHKGIGPSNILAMTFTIAAASEMRERIGRVAGKTAAKELTISTFHSFSLQLCR
MHAEKLGRTPEFLIYGHGQQRRAVIEAVRLLNDKKNGPRDELCQLNDKNSPQHFKERSKK
WLKFVTQAKSAGRTPDDYYKIGNETGAAVLQSYNDILKSCNALDYHDLISCSIKLLTDFP
EVLEECQELWKAMVIDEFQDTSAVQYGLLHILASHKRITIVGDEDQSIFGFSGADASGFD
SFRKDFSLHKEVRLSKNYRSTRCIVEAASFLIQNNSKRCQSKRVLTDNSVGSKITIKECC
NEDAQCSFVVDKILEIASDGTTEKSSFGDIAVLFRRQVSGKIFQAAFRNRKIPFNVHGVA
FYRKKVVKGIIAMLRTTLPGSDDGSFRRVFKALLPSEKEEKMKVIEYIEKVSTVRKSSFI
SAARDIFSAKVSGTFKRSQLSQGRKVLLMIDMISKLVKREESISAVITSVANMIPQKYLL
EQRAVHDNDGGKLLNEDHDVRPVLQYLLDDVSDFLKTHKNPIEGESECKTEGQGCANILK
AFIDHISERESENFRTRRHDNKDSVTVTTIHQSKGLEWDTVFIVKANESEIPLLHEFNGI
TNERSNSIEEERRLLYVAMTRARKKLFILHVIMDSNWQVLQPSRFLREIPRHLQETQEEL
TNHQKLQKGTPQSGSAEKVESVDHRITIDDPLSEPVDGMSKESIDTLELCNSKIFLKRFN
AEDRTVVSHLFHQWAKKPAFQEPRRLLKKVEFVIDERLRVKKSTHKDVLRALKSSLTCEE
ALQYAESVLNWEKIPAEKRAYLMREKQEYFQKLRIESSMGTSEPTPKQIAYLQSLGCTTV
PSSRLHASRLIEEYKSL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctagagagtagaaacaacatgaatgaatcggtaaacaacaaggagaatgtagttggt
agtggtggcggattaacggcggaacagaaagctcgaatctcttcaaagttcagagcagca
aaggcacttcttgctcgcaaaaggccactccatgattgctccaccacatccctcgataaa
gttgggaaggctcagagaactacatccttggaccggattgatggtgataaaaggtttcct
cttactgagattccgatgaacactccgtctcccatctatgagaagggttccaataaaacg
ttcaatgtgtttaccagtgttaagggctcacaagttcgtgaatgtggtagcagcatcaat
gcaaggactacgcgtgagatacagtttcaaacagttgaaactttcaagttctctagcaat
agaagtgaatcagttgaatctaacctaagtgaaaacggtggaagtgttcaagtggagaac
atggttgggttgaatacatacataactccagtgaggcaacctggattttctggcttgact
gagtcatccttctcatcaactgtgctagatgatgattttgatgaacacattttggacgaa
atagatgctttatgtgagcaaaactcaaaagaaaagcctgggaagaggttcaacagcatt
ccaattgaaaatcatcacataaacaacttggacaaggaggataacttaaatgctgttgtt
tctagtgataattcaggacaggagtgcattttatcaaggggtaatcaagaaagtgaagca
gaaagatcaaagagcagcggacctgataactcaaatcttgtcaggtcagatgaagctttt
aaacttgaatgcattctgaattcaaccggtaatcaagaatgtgaattagaggatccaaaa
agctgcaaggccacagatactgggagcaagttggaggcaacagatatcaggaacatgcct
gaggattatataaagtatgtagagtcactgaatgacagacaacaggaggcagcttgtagt
gacatttcaatccctcttatcattgttgctggaccaggaagtggcaagacatctacaatg
gttggacgagtcctgatgctactgcacaagggtattggtccgtcaaacattcttgctatg
acttttacaatagcagcagcttctgaaatgagggagagaatcggaagagttgcagggaag
acagcagcaaaggagctcacgatcagcacatttcactcgttttctttgcaactttgccgc
atgcatgctgagaagttaggtcgaacacctgaatttctcatatatggacatgggcagcag
agaagagctgtcattgaagcagtccgcttactgaatgataagaaaaacggacctcgtgat
gagctttgccagcttaatgacaagaattctcctcaacattttaaggagagatcaaagaag
tggttaaagtttgtaactcaagccaagtctgcaggaaggacgccggacgactactataaa
attggaaatgaaactggagctgcagttctgcaaagctacaacgatatattaaaatcatgc
aatgctttggattaccatgacttgatcagttgttctatcaagctcttgactgattttcca
gaagttttagaagagtgccaggaattatggaaagcaatggtgattgatgagtttcaagac
acaagtgctgtgcagtatggacttttacatatccttgcatcgcataaacgcataactatt
gttggtgatgaagatcagtccatttttggttttagtggcgctgatgcctctggatttgat
tcatttcggaaagatttttctttgcacaaagaggtcagacttagtaaaaattaccggtcc
acacgttgcattgttgaagctgcatcatttcttatacaaaacaattcgaaaaggtgccaa
tcaaaacgtgttcttactgataattctgttgggtcaaagataactatcaaagaatgctgc
aacgaggatgcacaatgttcttttgttgttgataaaatattagaaattgcttctgatggc
acaactgaaaagtcctctttcggcgacatagcagttctattccggaggcaggtgtcagga
aaaatctttcaagcggcatttcgtaatagaaaaatcccattcaatgtccatggcgtggcc
ttctataggaaaaaggtggtcaagggcatcattgctatgcttagaacaactttacctggt
tctgatgatggttcatttcgaagagtattcaaggccttactgccttcagaaaaagaagaa
aaaatgaaggtaattgaatacattgaaaaagtttccactgtaaggaaaagtagcttcatt
tcagcagcacgagacatatttagtgctaaagtatctggcacattcaagaggagtcaactt
agtcaagggcggaaagtgttgctcatgatagacatgatttcgaaactcgtcaaaagggaa
gaatccatttcagctgtcattacttcagtggctaacatgataccccagaaatatcttctt
gaacagcgggcagttcatgataatgatggagggaagttgcttaacgaagatcatgatgtt
agacctgttcttcaatatctattggacgatgtgtctgatttccttaaaactcataagaat
cccatagaaggagaaagtgaatgcaaaacagaaggacaaggttgtgccaacatactgaaa
gcttttatcgatcatatatctgaacgggagagtgaaaatttccgtacaaggagacatgat
aacaaagactctgttacagtcacgacaattcatcagtcaaaaggcttagagtgggatacg
gttttcatagttaaggcaaatgaatcagagattcccttgttacatgaatttaatggcatc
acaaatgaaaggagcaattcaattgaggaggagagacgcttactatatgtggcaatgact
cgtgcacggaaaaagcttttcattttgcatgtaattatggattcaaattggcaggttctt
caaccttcacgttttctgagagaaattccccgtcatcttcaagagacccaagaagagctg
accaatcaccaaaaactccagaagggaactcctcagagtggttcagctgaaaaggtggaa
tctgttgatcatagaataactatagatgatcctctcagtgaaccagtcgacggaatgtcc
aaagagtcaatcgacacactggagctatgcaattccaaaatcttcctaaaaagatttaat
gcggaagaccgaacagtggtatctcatttgttccatcaatgggccaaaaagcctgcattt
caggaaccacggaggttgcttaaaaaggtagagtttgtcattgatgagcgccttagagtc
aagaagagcactcacaaggatgttttacgtgccttaaagtcctcattaacttgtgaggaa
gctttacagtatgctgaatctgtgttgaactgggagaaaattcctgctgaaaagcgtgct
tacttaatgagagagaaacaggagtacttccaaaaactacggattgaaagttcgatgggt
acatcagaaccaactcccaaacagattgcatatcttcagagtctaggatgcactacggtt
ccttcatcccgtctccatgcatcacggttgattgaagaatataaatccttgtag
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