KEGG   Solanum lycopersicum (tomato): 101245831
Entry
101245831         CDS       T02665                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101245831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sly03032]
    101245831
   03400 DNA repair and recombination proteins [BR:sly03400]
    101245831
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    101245831
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     101245831
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc_N 5_3_exonuc PylC-like_N
Other DBs
NCBI-GeneID: 101245831
NCBI-ProteinID: XP_004235776
UniProt: K4BM56
LinkDB
Position
3:64634397..64638184
AA seq 544 aa
MGIKDLLRFMKPYVETAHIKKYAGKRVGIDAYSWLHKGAYSCSMELCLNSEGDKKLQYLN
YFMHRINMLRHYKITPVVVFDGGNLPCKSATEDERHKRRKTNRDQAMLKLKEGNVAGAVE
LFQRAVSVTPSMAHHLIQILKSENIEFVVAPYEADAQLAYLSNLKEEKNGIVAVISEDSD
LLAYGCPAVFFKMDANGNGQEVVLDHVFSCDTRVPSFRHFNKDLFTGMCVLAGCDFLPSV
PGIGITRAYNLVSKYRNLDRVLSMLKFEKGDQMPEDYTKSFREAVAVFYHARIYDVSLKR
IKHLKPIPEELLQFLDEELDFLGPEILPSLAMSIAQGNIDPCTMEAFDVFSSKVNHVSTA
NIKKISGPFSRQEAFTQASKDSSVFAISSSKSRKETAVVETTQASGAEQTQSPFMDESEC
LEEAVALQNIICPSISTRKMVAEEKKSHRKEVLKVPDNNPFRKRKVEEFEPDEMDSVTEL
VSELTDVESLEVICTIPESQQSVESKPVKRIELKRVTKEKKVKRSNSQSSENKKNTILNF
FSRV
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgggtatcaaagatctcctccggttcatgaagccctatgttgaaactgcccacataaaa
aaatacgcaggcaaaagggtgggaatcgatgcttattcttggcttcacaaaggagcatat
tcatgtagtatggagctttgccttaattcggagggtgataagaaattgcagtacttgaat
tacttcatgcatcgaatcaatatgcttcgacattataagatcactcctgtagttgttttt
gatggtggcaacttaccctgcaagagtgctactgaagacgagagacacaagagaaggaaa
acaaatagagatcaggcaatgttgaagctaaaggaaggcaatgttgctggcgctgttgag
ctcttccagagggctgtgagtgtcactccttcaatggcgcatcatctcattcagattctg
aagtcagagaatatagaattcgttgttgcaccatatgaagcggatgcacaattagcctac
ttgtctaacctcaaagaagaaaagaatggaattgtggcagtgatttctgaagatagtgac
ttactagcatatggctgtcccgctgttttctttaagatggatgccaatggaaatggtcaa
gaagtggtactagaccatgttttcagttgtgatactcgtgttccttccttcagacatttc
aacaaagatttatttacaggcatgtgtgtattagctggctgtgattttcttccttctgtc
cctggtataggaattactagagcttataatctggtctccaaatatcgcaacttagatcga
gttctttccatgttaaagttcgagaaaggagatcaaatgcccgaagattacacaaaatca
tttagagaagcagttgcagttttctatcatgctagaatatatgatgttagtttgaagcgg
atcaagcacttgaaacccatcccagaagagctgttgcagtttttggacgaagaacttgac
ttcttaggaccagaaattcttccgtcattggcaatgtcaattgctcaaggtaacatagat
ccttgtacaatggaggccttcgatgtcttctccagtaaagtaaatcatgtgtctactgca
aacatcaagaaaatttctggtcccttctctcgacaagaggcatttactcaagcttcaaaa
gacagcagcgtttttgctatttcttcaagtaaatccagaaaagaaacagcagtggtggag
accacacaagcctctggtgctgaacagacgcagagtccgtttatggatgaaagtgaatgc
ttagaggaagcagtagctcttcaaaacataatatgcccttcaatatcaactcggaagatg
gtggcagaagagaaaaagagtcatcgaaaagaagtgctgaaagttccagataataatcct
tttaggaaaagaaaagtggaggaatttgagccagatgagatggatagtgttactgaacta
gtctcagaacttactgatgttgaaagcctggaagttatatgcacaattccagaatcacaa
cagagtgtggaatctaagccagttaaaaggattgagttaaaaagagttaccaaagaaaag
aaggttaagaggagtaatagccaaagttcagaaaacaagaaaaacactatactaaatttc
ttttctcgagtgtaa

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