Solanum lycopersicum (tomato): 101245879
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Entry
101245879 CDS
T02665
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101245879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101245879
03036 Chromosome and associated proteins [BR:
sly03036
]
101245879
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
101245879
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
101245879
RSF complex
101245879
WICH complex
101245879
B-WICH complex
101245879
NORC complex
101245879
BRF complex
101245879
NuRF complex (fruit fly)
101245879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
101245879
NCBI-ProteinID:
XP_004229214
LinkDB
All DBs
Position
1:72132604..72143720
Genome browser
AA seq
1065 aa
AA seq
DB search
MARNTRAKSSSSEPLSDGSEEEQVNDLVNDEEDEEELEAVARSADDDGDDEAVADREDGD
DDEDEEEDIAANEISKREKARLKDMQRRKKQKIQEMLDAQNAAIEADMSNKGKGRLKYLL
EQTELFAHFAKGDQSTSEKKTKGRGRHASKITEEEEDEEYLKEEDGGLSGNTRLLAQPSC
IQGKMRDYQLAGLNWMIRLYENGINGILADEMGLGKTLQTISLLAYLHEFRGITGPHMVV
APKSTLGNWMNEIKRFCPIIRAVKFLGNPEERRYIREDLLVAGKFDVCVTSFEMAIKEKS
ALRRFNWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWALLNFLL
PEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG
MSQMQKNYYRALLQKDFEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEH
LIENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYRGHQYCRIDGNTGGED
RDASIEAYNRPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIG
QKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAE
MVFSSKDSTITDEDIDRIIAKGEEATAALDAKMKKFTEDAIKFKMDDTADLYDFEDEKDE
NKAHFKKIAGDNWIEPPRRERKRNYSESEYFKQTMRPSGPARPKEPRIPRMPQLHDFQFF
NTQRLSELYEKEVRFLMQAHQKNQLKDSIEVEEPEDVGDPLTADEQEEKDKLLEEGFSTW
SRRDFNTFIRACEKYGRNDIESIAAEMEGKTEEEVERYANVFKERYKELNDYDRIIKNIE
RGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYG
NWDELKAAFRTAPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEFDERERQARKEKKL
AKNATPSKRAVARQAAKSPPTSKKRKQSSMDDFVSSAKRRSDGTT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaacacgagagcgaaatcctcgtcgtcggagccattatcggacggttcagag
gaggagcaagtcaacgatctagtcaacgatgaggaagatgaggaggagcttgaagctgtc
gctaggtcagcagatgatgacggcgatgacgaagctgttgctgatagagaagacggtgat
gatgatgaagatgaggaggaagacattgcagctaatgaaatctccaagcgtgaaaaggca
cggttaaaagatatgcagaggcgtaagaagcaaaagatacaggaaatgttggatgcgcag
aatgctgcaatagaagctgacatgagtaacaaggggaaggggcgtcttaagtatcttttg
gagcagacagagttatttgcacattttgcaaaaggcgatcaatcgacttcagaaaagaag
acaaaaggaaggggccgtcatgcgtcaaagataaccgaagaggaagaagatgaggagtat
ctcaaagaagaagatggtgggctgtccgggaatacacggctattggcacaaccttcttgt
attcagggaaagatgagggattatcaacttgctggtttgaactggatgatacggctatat
gagaacggcataaatgggatacttgctgatgaaatgggtcttggtaagaccttacaaacc
atctctttgctggcgtacctgcatgaatttagagggattactggtcctcacatggttgtt
gctccaaaatccacactaggcaattggatgaatgaaatcaaacgtttttgtcctatcata
cgtgctgtaaagttccttgggaaccctgaagaaaggagatacattcgagaggatttgcta
gttgctgggaagtttgatgtgtgtgtcacaagttttgagatggctatcaaagagaagtct
gctttacgacgctttaattggcgttacatcatcattgatgaggctcatagaatcaagaat
gaaaattctcttctttccaaaaccatgaggctctacagcactaattataggctgttgatc
acagggacgccacttcagaataatcttcatgagctctgggcgcttctgaactttttgcta
ccagagatctttagctcggctgagacatttgatgagtggtttcaaatatccggtgagaat
gaccagcaggaggtggtccaacagcttcataaggtccttcgtccattccttcttaggaga
ctgaagtctgatgttgagaaaggtctgcctccaaagaaggaaacaattctcaaggtcggt
atgtctcagatgcagaaaaactactatcgggctttgttgcagaaagattttgaggttgtt
aattctggaggagagcgcaagcgtcttcttaatatagcaatgcagctccgaaaatgttgt
aatcatccatatcttttccaaggagctgagccaggacctccatatacaaccggagagcat
ctcatagaaaatgctggcaaaatggttcttcttgataagttgcttcctaagctgaaggaa
cgaggctcaagggttttaatattttcgcagatgacacggctactggacatccttgaagat
tacctgatgtatcgaggtcaccagtattgtcggattgatggaaacactggtggagaagat
cgtgatgcttctattgaagcatataacagaccagggagtgaaaaatttgccttcttattg
tcaaccagagctggtggtcttggtatcaatcttgctacggcagatattgttattctttat
gacagtgactggaatccacaggttgatttgcaggctcaggaccgcgcccataggattgga
cagaagaaggaagtccaagtattccgtttctgcactgagtatacaattgaggagaaagtg
attgaaagggcttataagaagctggcacttgatgcactggtcatccaacagggacgactg
gctgagcaaaaagctgttaataaggatgaactgctgcagatggtgcggtttggtgctgaa
atggttttcagttccaaagatagcactataacagatgaggatattgatagaatcattgcc
aaaggagaagaggcaacagcagcacttgatgccaagatgaagaagtttacagaagatgct
atcaaatttaaaatggacgatactgctgatttgtatgactttgaagacgagaaggatgaa
aacaaggcacatttcaagaaaattgctggtgacaattggatagaacctccaagaagggag
agaaagcgcaattactcggagtctgaatatttcaagcaaaccatgcgaccaagtggtcct
gctagacctaaagagcccaggattcctaggatgcctcagctgcacgactttcagttcttt
aatacccagaggctaagtgagctgtacgagaaggaagttcgttttctcatgcaagctcac
cagaaaaatcaattaaaagatagcattgaagtggaagagcccgaagatgtcggagatcct
ttaactgccgacgagcaggaagagaaggacaaattattagaagaaggattttcaacatgg
agtaggagagatttcaatacttttatcagggcatgtgagaagtatggtcggaatgacata
gaaagtattgctgctgaaatggaaggaaagacagaggaggaggttgaaagatacgcaaat
gttttcaaagaaagatacaaagagctaaatgattatgataggattataaagaatattgaa
agaggagaggctagaatttcacgaaaagatgagatcatgaaagcaattgggaagaagttg
gaccgctacaagaatccatggttggagttgaagattcagtatggtcagaacaaaggaaaa
ttgtacaatgaggagtgtgatcgtttcatgatatgtatggttcacaagcttggctatgga
aactgggatgagctaaaggctgcattccgaacagctcctttgtttcggtttgattggttt
gtgaagtctcggacaactcaagaacttgccagaagatgtgatacacttattcgtttggtg
gagagggaaaaccaagaatttgatgagagggagagacaggcacgcaaagaaaagaaactt
gctaagaacgcgacaccatcaaagcgcgctgtggcaagacaagcagccaaaagccctccc
acctcaaagaaacggaagcagtcatcaatggatgattttgtgagctcggccaagagaaga
agtgatggtacaacctag
DBGET
integrated database retrieval system
